RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SPAG6O75602 509 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 KRT38O76015 456 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 FGF3P11487 239 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 NCF2P19878 526 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 IL4RP24394 825 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 MSX2P35548 267 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 COPAP53621 1224 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 PDK3Q15120 406 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 DUOXA2Q1HG44 320 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 PPM1JQ5JR12 505 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 N4BP2L1Q5TBK1 243 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 PAOXQ6QHF9 649 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 FRMD7Q6ZUT3 714 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 PPTC7Q8NI37 304 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 ZNF296Q8WUU4 475 aaPredicted RBP14.76□□□□□ -0.05
MSH5-206ENST00000423982 MOCOSQ96EN8 888 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 ADPGKQ9BRR6 497 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 DNAJB4Q9UDY4 337 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 ZNF180Q9UJW8 692 aa14.76□□□□□ -0.05
MSH5-206ENST00000423982 ZBED1O96006 694 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 MMP3P08254 477 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 CRHR1P34998 444 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 SLC1A6P48664 564 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 GK3PQ14409 553 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 LRRC23Q53EV4 343 aaPredicted RBP14.75□□□□□ -0.05
MSH5-206ENST00000423982 PQLC3Q8N755 202 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 AGR3Q8TD06 166 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 DEPDC1BQ8WUY9 529 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 SIGLEC10Q96LC7 697 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 NRBP2Q9NSY0 501 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 ZNF358Q9NW07 568 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 hCG_2014768A0A024R1R8 64 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.75□□□□□ -0.05
MSH5-206ENST00000423982 MYADML2A6NDP7 307 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 M0QYV0 167 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 PABPC4LP0CB38 370 aaKnown RBP14.75□□□□□ -0.05
MSH5-206ENST00000423982 ITGAXP20702 1163 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 CLCN3P51790 818 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 LGSNQ5TDP6 509 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 IQSEC1Q6DN90 963 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 WDR75Q8IWA0 830 aaKnown RBP14.75□□□□□ -0.05
MSH5-206ENST00000423982 ARHGAP18Q8N392 663 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 FNIP1Q8TF40 1166 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 TFB1MQ8WVM0 346 aaKnown RBP14.75□□□□□ -0.05
MSH5-206ENST00000423982 RXFP2Q8WXD0 754 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 RNF157Q96PX1 679 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 VCX3BQ9H321 246 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 SMARCAD1Q9H4L7 1026 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 VCX3AQ9NNX9 186 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 PAK5Q9P286 719 aa14.75□□□□□ -0.05
MSH5-206ENST00000423982 APOBEC2Q9Y235 224 aaKnown RBP14.75□□□□□ -0.05
MSH5-206ENST00000423982 H3BRB1 525 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 MICAL2O94851 1124 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 ALDOAP04075 364 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 VAV1P15498 845 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 IDH3AP50213 366 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 KRT81Q14533 505 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 PPP6R3Q5H9R7 873 aaPredicted RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 C10orf107Q8IVU9 208 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 FAM81AQ8TBF8 368 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 PRPF31Q8WWY3 499 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 MPP4Q96JB8 637 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 TUT1Q9H6E5 874 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 ZDHHC7Q9NXF8 308 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 ERAP1Q9NZ08 941 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 PSAT1Q9Y617 370 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 RBM47A0AV96 593 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 H3BNX3 289 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 TPP1O14773 563 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 DCXO43602 365 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 CCNT2O60583 730 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 CSDE1O75534 798 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 MYL3P08590 195 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 INSRRP14616 1297 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 CCND3P30281 292 aaPredicted RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 L1CAMP32004 1257 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 ATXN3P54252 364 aaPredicted RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 FOLH1Q04609 750 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 TLR1Q15399 786 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.74□□□□□ -0.05
MSH5-206ENST00000423982 PGM2L1Q6PCE3 622 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 AAGABQ6PD74 315 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 UGT2A3Q6UWM9 527 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 SLC4A11Q8NBS3 891 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 PCDH19Q8TAB3 1148 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 RAET1EQ8TD07 263 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 SORT1Q99523 831 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 ELOVL4Q9GZR5 314 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 PREBQ9HCU5 417 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 GNEQ9Y223 722 aaKnown RBP14.74□□□□□ -0.05
MSH5-206ENST00000423982 INPP5FQ9Y2H2 1132 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 COMMD3-BMI1R4GMX3 469 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 TRIP11Q15643 1979 aa14.74□□□□□ -0.05
MSH5-206ENST00000423982 FAM159BA6NKW6 160 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 ZBTB42B2RXF5 422 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 ADCY3O60266 1144 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 MSCO60682 206 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 ENDOD1O94919 500 aa14.73□□□□□ -0.05
MSH5-206ENST00000423982 PDGFRAP16234 1089 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms