RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 LNPKQ9C0E8 428 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PCDH12Q9NPG4 1184 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TDP1Q9NUW8 608 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 KCNK4Q9NYG8 393 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RRN3Q9NYV6 651 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RARRES3Q9UL19 164 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 LY75O60449 1722 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PSMA7O14818 248 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CDC40O60508 579 aaKnown RBP eCLIP3.66□□□□□ -1.824e-6■■□□□ 13.7
TOP2A-201ENST00000423485 WDPCPO95876 746 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RHOAP61586 193 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MRPS21P82921 87 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TBX2Q13207 712 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TRIM28Q13263 835 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CAMK2GQ13555 558 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CSRP2Q16527 193 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 DEFB109BQ30KR1 87 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SMYD5Q6GMV2 418 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CEP128Q6ZU80 1094 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SDCCAG8Q86SQ7 713 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RCOR2Q8IZ40 523 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 IQCKQ8N0W5 287 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 FSTL5Q8N475 847 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 NAT16Q8N8M0 369 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 THOC3Q96J01 351 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PGBD1Q96JS3 809 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 EIF3CQ99613 913 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CATSPERBQ9H7T0 1116 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GKN1Q9NS71 199 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 INTS13Q9NVM9 706 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 RAPGEFL1Q9UHV5 662 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MRPS33Q9Y291 106 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 A6NL46 340 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 B4DGG1 531 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PPP1R3GB7ZBB8 358 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TNFSF14O43557 240 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 B4GALT4O60513 344 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ALAS2P22557 587 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 FOLR3P41439 243 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CCL11P51671 97 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 AFF3P51826 1226 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SNRPD1P62314 119 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 EMC2Q15006 297 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SGCBQ16585 318 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 C9orf50Q5SZB4 431 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF746Q6NUN9 644 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CNSTQ6PJW8 725 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GFRALQ6UXV0 394 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 FRA10AC1Q70Z53 315 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MEPCEQ7L2J0 689 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SH3BP5LQ7L8J4 393 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PIM3Q86V86 326 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 MYLK4Q86YV6 388 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 LRRC71Q8N4P6 559 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TMEM156Q8N614 296 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 COG1Q8WTW3 980 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GAB3Q8WWW8 586 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PTERQ96BW5 349 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PPP1R14BQ96C90 147 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF578Q96N58 590 aaPredicted RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PRPF18Q99633 342 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 EPAS1Q99814 870 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SELENOOQ9BVL4 669 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ELOVL4Q9GZR5 314 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 KCNQ5Q9NR82 932 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ZNF446Q9NWS9 450 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 TLR7Q9NYK1 1049 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PKD2L2Q9NZM6 624 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 GTF2IRD1Q9UHL9 959 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 ZNHIT2Q9UHR6 403 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PCDHB10Q9UN67 800 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 PPIEQ9UNP9 301 aaKnown RBP3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SQORQ9Y6N5 450 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 SHROOM3Q8TF72 1996 aa3.66□□□□□ -1.82
TOP2A-201ENST00000423485 CCDC187A0A096LP49 1063 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 HEPACAM2A8MVW5 462 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 TRUB2O95900 331 aaKnown RBP3.65□□□□□ -1.82
TOP2A-201ENST00000423485 IFNA16P05015 189 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 AKR1B1P15121 316 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 CD46P15529 392 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 CD6P30203 668 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 ACADSBP45954 432 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 CDR2Q01850 454 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 ADCY2Q08462 1091 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 TSNAXIP1Q2TAA8 658 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 EFHC2Q5JST6 749 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 TEX35Q5T0J7 233 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 DPY19L2P1Q6NXN4 242 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 CHST9Q7L1S5 443 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 EFL1Q7Z2Z2 1120 aaKnown RBP3.65□□□□□ -1.82
TOP2A-201ENST00000423485 SZRD1Q7Z422 152 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 CCDC105Q8IYK2 499 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 C12orf76Q8N812 135 aaPredicted RBP3.65□□□□□ -1.82
TOP2A-201ENST00000423485 GPBAR1Q8TDU6 330 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 ZDHHC12Q96GR4 267 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 NDC1Q9BTX1 674 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 C2orf49Q9BVC5 232 aaPredicted RBP3.65□□□□□ -1.82
TOP2A-201ENST00000423485 TASP1Q9H6P5 420 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 GGA2Q9UJY4 613 aa3.65□□□□□ -1.82
TOP2A-201ENST00000423485 FBXL5Q9UKA1 691 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms