RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PRKCQQ04759 706 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 AUHQ13825 339 aaKnown RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 ARL13BQ3SXY8 428 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 MPPE1Q53F39 396 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 DAB2IPQ5VWQ8 1189 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 FYB2Q5VWT5 728 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 ZNF852Q6ZMS4 543 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 C14orf80Q86SX3 495 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 C12orf40Q86WS4 652 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 RALGPS2Q86X27 583 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 CHSY1Q86X52 802 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 LGI2Q8N0V4 545 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 CFAP52Q8N1V2 620 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 CCDC185Q8N715 623 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 DDI1Q8WTU0 396 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 FAM3CQ92520 227 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 SHDQ96IW2 340 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 PRMT1Q99873 361 aaKnown RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 DDX50Q9BQ39 737 aaKnown RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 DESI2Q9BSY9 194 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 MAGEB5Q9BZ81 275 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 FBRSL1Q9HCM7 1045 aaKnown RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 LUC7LQ9NQ29 371 aaKnown RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 MARK1Q9P0L2 795 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 STIM2Q9P246 746 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 PCSK1NQ9UHG2 260 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 IP6K2Q9UHH9 426 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 F5P12259 2224 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 NUP210Q8TEM1 1887 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 TMEM110-MUSTN1A8MSY1 372 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 F5H5T6 163 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 TRIM24O15164 1050 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 TBL1XO60907 577 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 RNF8O76064 485 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 PENKP01210 267 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 CYBBP04839 570 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 PTMAP06454 111 aaKnown RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 MIPP30301 263 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 OPRD1P41143 372 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 NOP2P46087 812 aaKnown RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 RPS24P62847 133 aaKnown RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 KRT83P78385 493 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 CCZ1BP86790 482 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 CCZ1P86791 482 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 AMPD2Q01433 879 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 MTA1Q13330 715 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 PIGHQ14442 188 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 MESDQ14696 234 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 ACAP1Q15027 740 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 PON2Q15165 354 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 FBXL22Q6P050 247 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 ASCL5Q7RTU5 278 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 SLFN11Q7Z7L1 901 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 CPNE8Q86YQ8 564 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 RHOT2Q8IXI1 618 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 CCDC112Q8NEF3 446 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 FLCNQ8NFG4 579 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 RFFLQ8WZ73 363 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 IGSF8Q969P0 613 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 PDLIM2Q96JY6 352 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 C1orf74Q96LT6 269 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 PRICKLE1Q96MT3 831 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 HAPLN3Q96S86 360 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 P2RY13Q9BPV8 354 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 FOXQ1Q9C009 403 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 MFSD1Q9H3U5 465 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 TBC1D17Q9HA65 648 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 VANGL2Q9ULK5 521 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 CLEC4EQ9ULY5 219 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 NDRG2Q9UN36 371 aaKnown RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 MTF2Q9Y483 593 aaPredicted RBP9.59□□□□□ -0.87
PDGFC-202ENST00000422544 DUSP10Q9Y6W6 482 aa9.59□□□□□ -0.87
PDGFC-202ENST00000422544 A0A0U1RQJ8 604 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 KANSL1LA0AUZ9 987 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 FAM170BA6NMN3 283 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 FAM72CH0Y354 149 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 ARHGAP6O43182 974 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 SRGAP2O75044 1071 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 TULP3O75386 442 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 LRCH4O75427 683 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 MTA2O94776 668 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 PROSCO94903 275 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 TCF4P15884 667 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 HOXD9P28356 352 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 PCK1P35558 622 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 SSR1P43307 286 aaKnown RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 VAV2P52735 878 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 MESP2Q0VG99 397 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 UBXN2BQ14CS0 331 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 TCEAL1Q15170 157 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 FAM72AQ5TYM5 149 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 FAM72DQ6L9T8 149 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 KIAA1328Q86T90 577 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 FAM72BQ86X60 149 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 CIR1Q86X95 450 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 ETFBKMTQ8IXQ9 262 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 ZNF683Q8IZ20 524 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 PYROXD2Q8N2H3 581 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 NIPA2Q8N8Q9 360 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 ATRIPQ8WXE1 791 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms