RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.34■■□□□ 1.97
CDK9-202ENST00000421939 MFN1Q8IWA4 741 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 AHI1Q8N157 1196 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 HMGB4Q8WW32 186 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 NT5C3BQ969T7 300 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 ADAM33Q9BZ11 813 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 METTL5Q9NRN9 209 aaKnown RBP27.34■■□□□ 1.97
CDK9-202ENST00000421939 PIGVQ9NUD9 493 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 BCCIPQ9P287 314 aaKnown RBP eCLIP27.34■■□□□ 1.97
CDK9-202ENST00000421939 THAP10Q9P2Z0 257 aaPredicted RBP27.34■■□□□ 1.97
CDK9-202ENST00000421939 TMEM59LQ9UK28 342 aa27.34■■□□□ 1.97
CDK9-202ENST00000421939 LRRC53A6NM62 1247 aa27.33■■□□□ 1.97
CDK9-202ENST00000421939 F5H5T6 163 aa27.33■■□□□ 1.97
CDK9-202ENST00000421939 TIMM44O43615 452 aa27.33■■□□□ 1.97
CDK9-202ENST00000421939 TFE3P19532 575 aaPredicted RBP27.33■■□□□ 1.97
CDK9-202ENST00000421939 SLC25A52Q3SY17 297 aa27.33■■□□□ 1.97
CDK9-202ENST00000421939 ARCQ7LC44 396 aa27.33■■□□□ 1.97
CDK9-202ENST00000421939 CFAP52Q8N1V2 620 aa27.33■■□□□ 1.97
CDK9-202ENST00000421939 PGAP3Q96FM1 320 aaPredicted RBP27.33■■□□□ 1.97
CDK9-202ENST00000421939 PRMT1Q99873 361 aaKnown RBP27.33■■□□□ 1.97
CDK9-202ENST00000421939 STON1Q9Y6Q2 735 aa27.33■■□□□ 1.97
CDK9-202ENST00000421939 PTP4A2Q12974 167 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 CDH18Q13634 790 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 USP39Q53GS9 565 aaKnown RBP27.32■■□□□ 1.96
CDK9-202ENST00000421939 TRNP1Q6NT89 227 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 SND1Q7KZF4 910 aaKnown RBP eCLIP27.32■■□□□ 1.96
CDK9-202ENST00000421939 CHST9Q7L1S5 443 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 IRF2BP2Q7Z5L9 587 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 KIAA0907Q7Z7F0 614 aaPredicted RBP27.32■■□□□ 1.96
CDK9-202ENST00000421939 PHF13Q86YI8 300 aaPredicted RBP27.32■■□□□ 1.96
CDK9-202ENST00000421939 DCLK2Q8N568 766 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 FAM160A2Q8N612 972 aaPredicted RBP27.32■■□□□ 1.96
CDK9-202ENST00000421939 SORCS1Q8WY21 1168 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 TBCBQ99426 244 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 TTYH3Q9C0H2 523 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 CD248Q9HCU0 757 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 RAD54BQ9Y620 910 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 SPAG17Q6Q759 2223 aa27.32■■□□□ 1.96
CDK9-202ENST00000421939 LUC7L3O95232 432 aaKnown RBP27.31■■□□□ 1.96
CDK9-202ENST00000421939 F9P00740 461 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 CD70P32970 193 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 IL12RB1P42701 662 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 CXCR3P49682 368 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 UBASH3AP57075 661 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 DEUP1Q05D60 604 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 ENPP2Q13822 863 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 ZNF234Q14588 700 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 ASIC2Q16515 512 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 BRMS1LQ5PSV4 323 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 KIAA1211LQ6NV74 962 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 ADIPOR2Q86V24 386 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 KBTBD6Q86V97 674 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 CCDC117Q8IWD4 279 aaPredicted RBP27.31■■□□□ 1.96
CDK9-202ENST00000421939 CARNMT1Q8N4J0 409 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 FIBINQ8TAL6 211 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 EDEM3Q9BZQ6 932 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 TMEM51Q9NW97 253 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 ADAM22Q9P0K1 906 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 PAXBP1Q9Y5B6 917 aa27.31■■□□□ 1.96
CDK9-202ENST00000421939 WASH3PC4AMC7 463 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 CALB1P05937 261 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 GABRG2P18507 467 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 GSCP56915 257 aaPredicted RBP27.3■■□□□ 1.96
CDK9-202ENST00000421939 STARD3Q14849 445 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 FIGNQ5HY92 759 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 RABGAP1LQ5R372 815 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 TTC39BQ5VTQ0 682 aaPredicted RBP27.3■■□□□ 1.96
CDK9-202ENST00000421939 PHLDB2Q86SQ0 1253 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 PGBD3Q8N328 593 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 EMC1Q8N766 993 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 OLIG1Q8TAK6 271 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 LMLNQ96KR4 655 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 CFAP57Q96MR6 1250 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 SYT11Q9BT88 431 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 HS3ST4Q9Y661 456 aa27.3■■□□□ 1.96
CDK9-202ENST00000421939 DCLK1O15075 740 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 ZBTB24O43167 697 aaPredicted RBP27.29■■□□□ 1.96
CDK9-202ENST00000421939 PAGE1O75459 146 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 RETP07949 1114 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 LMAN2Q12907 356 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 FUT11Q495W5 492 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 MBLAC2Q68D91 279 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 MON1BQ7L1V2 547 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 C11orf74Q86VG3 221 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 ERLEC1Q96DZ1 483 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 TKTL2Q9H0I9 626 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 WDCPQ9H6R7 721 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 ARHGEF38Q9NXL2 777 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 INVSQ9Y283 1065 aa27.29■■□□□ 1.96
CDK9-202ENST00000421939 MUC22E2RYF6 1773 aaPredicted RBP27.29■■□□□ 1.96
CDK9-202ENST00000421939 ADCY5O95622 1261 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 NDUFV2P19404 249 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 PRKCHP24723 683 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 RDXP35241 583 aaKnown RBP27.28■■□□□ 1.96
CDK9-202ENST00000421939 GGCXP38435 758 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 PBX1P40424 430 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 C1QBPQ07021 282 aaKnown RBP27.28■■□□□ 1.96
CDK9-202ENST00000421939 AUHQ13825 339 aaKnown RBP27.28■■□□□ 1.96
CDK9-202ENST00000421939 PLK5Q496M5 336 aa27.28■■□□□ 1.96
CDK9-202ENST00000421939 SFMBT2Q5VUG0 894 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms