RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SEPT6Q14141 434 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF567Q8N184 647 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 RNF148Q8N7C7 305 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ACVR1CQ8NER5 493 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 SCYL1Q96KG9 808 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF570Q96NI8 536 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 CHRAC1Q9NRG0 131 aa13.73□□□□□ -0.21
MCF2L-213ENST00000421756 HMX2A2RU54 273 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 E9PBE3 544 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 KLHL41O60662 606 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 USP1O94782 785 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 HMBSP08397 361 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 POU6F1Q14863 301 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 ASRGL1Q7L266 308 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 C10orf107Q8IVU9 208 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 SMC1BQ8NDV3 1235 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 STMN2Q93045 179 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 TMEM209Q96SK2 561 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 SFMBT1Q9UHJ3 866 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 E7ESA3 106 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 SCAMP3O14828 347 aaKnown RBP13.72□□□□□ -0.21
MCF2L-213ENST00000421756 PMPCBO75439 489 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 MT-CYBP00156 380 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-213ENST00000421756 IRF9Q00978 393 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 NXNQ6DKJ4 435 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 ARHGAP36Q6ZRI8 547 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF534Q76KX8 674 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 NSL1Q96IY1 281 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 MYCBPQ99417 103 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-213ENST00000421756 XPNPEP3Q9NQH7 507 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 TAS2R1Q9NYW7 299 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 SLC39A10Q9ULF5 831 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 PLLPQ9Y342 182 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 WASF2Q9Y6W5 498 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 ZBTB24O43167 697 aaPredicted RBP13.72□□□□□ -0.21
MCF2L-213ENST00000421756 CSPG5O95196 566 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 PTPN7P35236 360 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 STILQ15468 1287 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 NOMO2Q5JPE7 1267 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 SWT1Q5T5J6 900 aaKnown RBP13.72□□□□□ -0.21
MCF2L-213ENST00000421756 SNX31Q8N9S9 440 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 C3orf58Q8NDZ4 430 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 IPMKQ8NFU5 416 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 PCED1BQ96HM7 432 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 KCNK13Q9HB14 408 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 IARS2Q9NSE4 1012 aaKnown RBP13.72□□□□□ -0.21
MCF2L-213ENST00000421756 EFR3BQ9Y2G0 817 aa13.72□□□□□ -0.21
MCF2L-213ENST00000421756 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 TM9SF1O15321 606 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 BUD23O43709 281 aaKnown RBP13.71□□□□□ -0.21
MCF2L-213ENST00000421756 STK10O94804 968 aaKnown RBP13.71□□□□□ -0.21
MCF2L-213ENST00000421756 FAM200BP0CF97 657 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 TGM2P21980 687 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 PAX7P23759 505 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 MATKP42679 507 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 DCAF4L1Q3SXM0 396 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 CFAP157Q5JU67 520 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 STRA8Q7Z7C7 330 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 TNIP3Q96KP6 325 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 OMDQ99983 421 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 TKTL2Q9H0I9 626 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-213ENST00000421756 C20orf96Q9NUD7 363 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-213ENST00000421756 TMEM216Q9P0N5 145 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 MCM8Q9UJA3 840 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 I6L893 689 aaPredicted RBP13.71□□□□□ -0.21
MCF2L-213ENST00000421756 CCND1P24385 295 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 PSEN2P49810 448 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 SARNPP82979 210 aaKnown RBP13.71□□□□□ -0.21
MCF2L-213ENST00000421756 CLEC20AQ6ZU45 233 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 PLD6Q8N2A8 252 aaKnown RBP13.71□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF276Q8N554 614 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 PPP4R1Q8TF05 950 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 ATP2A3Q93084 1043 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF670Q9BS34 389 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 RRAGCQ9HB90 399 aa13.71□□□□□ -0.21
MCF2L-213ENST00000421756 SDR42E2A6NKP2 422 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 C2CD2LO14523 706 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 DLDP09622 509 aaKnown RBP13.71□□□□□ -0.22
MCF2L-213ENST00000421756 CD1EP15812 388 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 NPR3P17342 541 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 PTPN4P29074 926 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 SLC9A4Q6AI14 798 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 ZNF280DQ6N043 979 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 TFAP2DQ7Z6R9 452 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 NPWQ8N729 165 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 WNT8BQ93098 351 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 MPP6Q9NZW5 540 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 ST3GAL5Q9UNP4 418 aa13.71□□□□□ -0.22
MCF2L-213ENST00000421756 C9IYK1 514 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CFLARO15519 480 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 ETV4P43268 484 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PTDSS1P48651 473 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 GJA9P57773 515 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CDK16Q00536 496 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 PRKD1Q15139 912 aaPredicted RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 FAM187BQ17R55 369 aa13.7□□□□□ -0.22
MCF2L-213ENST00000421756 RPS27LQ71UM5 84 aaKnown RBP13.7□□□□□ -0.22
MCF2L-213ENST00000421756 CDKL2Q92772 493 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms