RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PRRX2Q99811 253 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 CNPY3Q9BT09 278 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 SLC2A11Q9BYW1 496 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 IRX2Q9BZI1 471 aaPredicted RBP16.3■□□□□ 0.2
BRAT1-202ENST00000421712 VANGL2Q9ULK5 521 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 SNX10Q9Y5X0 201 aa16.3■□□□□ 0.2
BRAT1-202ENST00000421712 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 H0Y626 953 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 ENDOD1O94919 500 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 CISD3P0C7P0 127 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 CDH18Q13634 790 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 RAB6CQ53S08 254 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 EMC10Q5UCC4 262 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 LRRC31Q6UY01 552 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 MFN1Q8IWA4 741 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 SPEM1Q8N4L4 309 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 EZH1Q92800 747 aaPredicted RBP16.29■□□□□ 0.2
BRAT1-202ENST00000421712 MYEOVQ96EZ4 313 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 IER2Q9BTL4 223 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 RAB6CQ9H0N0 254 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 TMPRSS4Q9NRS4 437 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 SPTLC3Q9NUV7 552 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 FBXO10Q9UK96 956 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 CLEC4EQ9ULY5 219 aa16.29■□□□□ 0.2
BRAT1-202ENST00000421712 A0A0A0MRY4 1105 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 TMEM191CA6NGB0 347 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 GFRA2O00451 464 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 SRGAP2O75044 1071 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 RNF8O76064 485 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 H2AFZP0C0S5 128 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 COL9A1P20849 921 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 CDC25BP30305 580 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 ADRA1BP35368 520 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 CXCL12P48061 93 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 CCR3P51677 355 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 HDAC4P56524 1084 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 MRPS21P82921 87 aaKnown RBP16.28■□□□□ 0.2
BRAT1-202ENST00000421712 OGDHQ02218 1023 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 GAS6Q14393 721 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 ASTE1Q2TB18 679 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-202ENST00000421712 FBXL22Q6P050 247 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 H2AFVQ71UI9 128 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 BNIPLQ7Z465 357 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 ANKS1BQ7Z6G8 1248 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 C14orf80Q86SX3 495 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 CIR1Q86X95 450 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-202ENST00000421712 PHTF2Q8N3S3 785 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 CCDC33Q8N5R6 958 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 ZNF557Q8N988 423 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-202ENST00000421712 CTNNBL1Q8WYA6 563 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-202ENST00000421712 CENPIQ92674 756 aaPredicted RBP16.28■□□□□ 0.2
BRAT1-202ENST00000421712 PANX2Q96RD6 677 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 PRMT1Q99873 361 aaKnown RBP16.28■□□□□ 0.2
BRAT1-202ENST00000421712 NUP85Q9BW27 656 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 ANLNQ9NQW6 1124 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 SLC8A2Q9UPR5 921 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 KMT2EQ8IZD2 1858 aa16.28■□□□□ 0.2
BRAT1-202ENST00000421712 LUC7L3O95232 432 aaKnown RBP16.27■□□□□ 0.2
BRAT1-202ENST00000421712 CYP1A2P05177 515 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 CSTF1Q05048 431 aaKnown RBP16.27■□□□□ 0.2
BRAT1-202ENST00000421712 ANGPT1Q15389 498 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 GEN1Q17RS7 908 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 ACBD5Q5T8D3 534 aaPredicted RBP16.27■□□□□ 0.2
BRAT1-202ENST00000421712 TTC39BQ5VTQ0 682 aaPredicted RBP16.27■□□□□ 0.2
BRAT1-202ENST00000421712 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 SLFN11Q7Z7L1 901 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 ZNF513Q8N8E2 541 aaPredicted RBP16.27■□□□□ 0.2
BRAT1-202ENST00000421712 USP33Q8TEY7 942 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 UCMAQ8WVF2 138 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 IGSF8Q969P0 613 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 ACDQ96AP0 544 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 C1orf74Q96LT6 269 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 TRIM7Q9C029 511 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 CIPCQ9C0C6 399 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 ZDHHC4Q9NPG8 344 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 ABCB8Q9NUT2 735 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 CTTNBP2NLQ9P2B4 639 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 SLC27A6Q9Y2P4 619 aa16.27■□□□□ 0.2
BRAT1-202ENST00000421712 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 ANTXRLA6NF34 631 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 PRRT4C9JH25 899 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 H0Y858 1186 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 I6L893 689 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 KLF8O95600 359 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 PABPC1P11940 636 aaKnown RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 HLA-FP30511 346 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 CYLC1P35663 651 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 SATB1Q01826 763 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 ZNF177Q13360 481 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 SDE2Q6IQ49 451 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 CHST9Q7L1S5 443 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 TRMT11Q7Z4G4 463 aaKnown RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.26■□□□□ 0.19
BRAT1-202ENST00000421712 ALLCQ8N6M5 410 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 CCDC185Q8N715 623 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 FIBINQ8TAL6 211 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 FNIP1Q8TF40 1166 aa16.26■□□□□ 0.19
BRAT1-202ENST00000421712 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms