RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 ZNF776Q68DI1 518 aaPredicted RBP17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 MSANTD2Q6P1R3 559 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 ZNF557Q8N988 423 aaPredicted RBP17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 ENGASEQ8NFI3 743 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 HNRNPLLQ8WVV9 542 aaKnown RBP17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 FASNP49327 2511 aaKnown RBP17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 TP53BP1Q12888 1972 aaPredicted RBP17.55■□□□□ 0.4
UPF3AP3-201ENST00000420996 TRABD2BA6NFA1 517 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 H0Y8X5 98 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 KCNK3O14649 394 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 IRAK2O43187 625 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 PAPSS1O43252 624 aaPredicted RBP17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 DFNA5O60443 496 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 IGLV3-27P01718 113 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 CD70P32970 193 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 CTSKP43235 329 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 DAOAP59103 153 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 CAMK2BQ13554 666 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 CBWD6Q4V339 395 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 PKDCCQ504Y2 493 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 CBWD3Q5JTY5 395 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 KCNT1Q5JUK3 1230 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 CBWD5Q5RIA9 395 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 TCERG1LQ5VWI1 586 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 RFWD3Q6PCD5 774 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 LAYNQ6UX15 382 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 UNC45BQ8IWX7 931 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 WFDC5Q8TCV5 224 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 ORAI3Q9BRQ5 295 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 SCML1Q9UN30 329 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 NCKAP1Q9Y2A7 1128 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 ITPR1Q14643 2758 aa17.54■□□□□ 0.4
UPF3AP3-201ENST00000420996 GOLGA4Q13439 2230 aaKnown RBP17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 PLXNA2O75051 1894 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 O00370 1275 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 TBL1XO60907 577 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 SLC11A2P49281 568 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 CYP4F3Q08477 520 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 SMAD1Q15797 465 aaKnown RBP17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 INAVAQ3KP66 663 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 NUGGCQ68CJ6 796 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 KIAA0895LQ68EN5 471 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 LCLAT1Q6UWP7 414 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 USP30Q70CQ3 517 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 ADAT2Q7Z6V5 191 aaKnown RBP17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 MARCH9Q86YJ5 346 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 SMYD4Q8IYR2 804 aaPredicted RBP17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 IRGQQ8WZA9 623 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 AZIN2Q96A70 460 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 TTC17Q96AE7 1141 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 LMLNQ96KR4 655 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 RSPH9Q9H1X1 276 aaPredicted RBP17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 APC2O95996 2303 aa17.53■□□□□ 0.4
UPF3AP3-201ENST00000420996 URB1O60287 2271 aaKnown RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 GOLGA6L7A0A1B0GV03 622 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 A0A1W2PQ27 194 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 A0A1W2PQ64 194 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 VILLO15195 856 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 ACSL4O60488 711 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 GABBR2O75899 941 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 ZNF202O95125 648 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 IGHV4-34P06331 123 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 LCP1P13796 627 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 TBXAS1P24557 533 aaPredicted RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 SLC6A4P31645 630 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 RACK1P63244 317 aaKnown RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 SFSWAPQ12872 951 aaKnown RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 FAM133BQ5BKY9 247 aaKnown RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 DCAF17Q5H9S7 520 aaPredicted RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 UBR7Q8N806 425 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 PDCD7Q8N8D1 485 aaKnown RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 FIBINQ8TAL6 211 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 SLC35F5Q8WV83 523 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 MYO19Q96H55 970 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 ACE2Q9BYF1 805 aaPredicted RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 PABPC3Q9H361 631 aaKnown RBP17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 MTG2Q9H4K7 406 aa17.52■□□□□ 0.4
UPF3AP3-201ENST00000420996 COL5A1P20908 1838 aaPredicted RBP17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 A0A1W2PPC4 97 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 FAM149AA5PLN7 773 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 E9PAM4 449 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 SLC16A3O15427 465 aaKnown RBP17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 ASLP04424 464 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 C21orf59P57076 290 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 TBX4P57082 545 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 ST8SIA6P61647 398 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 HNRNPA1L2Q32P51 320 aaKnown RBP17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 MFN1Q8IWA4 741 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 HJURPQ8NCD3 748 aaPredicted RBP17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 GANCQ8TET4 914 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 TFAP2BQ92481 460 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 LRIG1Q96JA1 1093 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 DDX50Q9BQ39 737 aaKnown RBP17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 GOLPH3LQ9H4A5 285 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 FBXL12Q9NXK8 326 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 STIM2Q9P246 746 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 FTSJ1Q9UET6 329 aa17.51■□□□□ 0.39
UPF3AP3-201ENST00000420996 A0A1B0GTQ1 180 aa17.5■□□□□ 0.39
UPF3AP3-201ENST00000420996 RNASEH1O60930 286 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms