RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PLXNA2O75051 1894 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 POLR2DO15514 142 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 KLRC4O43908 158 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 CUTAO60888 179 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 KIF20AO95235 890 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 YEATS4O95619 227 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 LATS1O95835 1130 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 WNT1P04628 370 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 PABPC1P11940 636 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 JUPP14923 745 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 C21orf59P57076 290 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 SEMG2Q02383 582 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 STK4Q13043 487 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 TARDBPQ13148 414 aaKnown RBP eCLIP10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 DNAJC3Q13217 504 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 HES3Q5TGS1 186 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 PM20D1Q6GTS8 502 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 PCSK4Q6UW60 755 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 LRRC69Q6ZNQ3 347 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 CHST9Q7L1S5 443 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 TAS1R2Q8TE23 839 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 MYO19Q96H55 970 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 IMPG2Q9BZV3 1241 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 PABPC3Q9H361 631 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 EBF2Q9HAK2 575 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 UPF2Q9HAU5 1272 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 SERGEFQ9UGK8 458 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 SCML1Q9UN30 329 aa10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 HBS1LQ9Y450 684 aaKnown RBP10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 TP53BP1Q12888 1972 aaPredicted RBP10.64□□□□□ -0.71
TNFAIP3-202ENST00000420009 TENM4Q6N022 2769 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 TEX51A0A1B0GUA7 166 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 A0A1W2PR77 199 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 PDXKO00764 312 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 MAPK13O15264 365 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 YKT6O15498 198 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 RRP8O43159 456 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 LDOC1O95751 146 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 ITGAVP06756 1048 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 TRIM49P0CI25 452 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 TRIM49CP0CI26 452 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 EPHA8P29322 1005 aaPredicted RBP10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 HARS2P49590 506 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 SGSHP51688 502 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 VAMP7P51809 220 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 GALCP54803 685 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 PPP3CAQ08209 521 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 KCNJ12Q14500 433 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 ZNF394Q53GI3 561 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 PRAMEF14Q5SWL7 426 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 ADGRF1Q5T601 910 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 SFMBT2Q5VUG0 894 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 CEP135Q66GS9 1140 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 MBLAC2Q68D91 279 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 ARHGAP17Q68EM7 881 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 NCEH1Q6PIU2 408 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 FMNL3Q8IVF7 1028 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 GRAMD1CQ8IYS0 662 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 WFDC5Q8TCV5 224 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 RFFLQ8WZ73 363 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 BAP1Q92560 729 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 LMLNQ96KR4 655 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 ULBP1Q9BZM6 244 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 DNAI2Q9GZS0 605 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 MTG2Q9H4K7 406 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 OLA1Q9NTK5 396 aaKnown RBP10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 KNTC1P50748 2209 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 MGAQ8IWI9 3026 aa10.63□□□□□ -0.71
TNFAIP3-202ENST00000420009 BRINP1O60477 761 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ZBED1O96006 694 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ATP5BP06576 529 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 SLFN14P0C7P3 912 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ABCB4P21439 1286 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 CD70P32970 193 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 AFMP43652 599 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 GCLMP48507 274 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 TKTL1P51854 596 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 RAD23BP54727 409 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 TLE3Q04726 772 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ENPEPQ07075 957 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ILKQ13418 452 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ARID5BQ14865 1188 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 MPP7Q5T2T1 576 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 KANSL1Q7Z3B3 1105 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 GPR155Q7Z3F1 870 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ZNF605Q86T29 641 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 CACTIN-AS1Q8N1I8 211 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 EID2Q8N6I1 236 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 ANKRD52Q8NB46 1076 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 SLC4A11Q8NBS3 891 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 OR2T34Q8NGX1 318 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 NDRG1Q92597 394 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 SKA1Q96BD8 255 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 TMA16Q96EY4 203 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 INTS4Q96HW7 963 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 FAXDC2Q96IV6 333 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 HEXIM2Q96MH2 286 aaKnown RBP10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 IRX2Q9BZI1 471 aaPredicted RBP10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 GDF3Q9NR23 364 aa10.62□□□□□ -0.71
TNFAIP3-202ENST00000420009 FBXL12Q9NXK8 326 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms