RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PRKCHP24723 683 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 NR1I3Q14994 352 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 E4F1Q66K89 784 aaPredicted RBP21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 CEP68Q76N32 757 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 ARCQ7LC44 396 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 LUZP1Q86V48 1076 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 HJURPQ8NCD3 748 aaPredicted RBP21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 HMGB4Q8WW32 186 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 RLN3Q8WXF3 142 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 LOXL4Q96JB6 756 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 TMEM245Q9H330 911 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 FAM204AQ9H8W3 233 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 CD93Q9NPY3 652 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 ARHGEF38Q9NXL2 777 aa21.36■■□□□ 1.01
PKNOX1-202ENST00000418336 A0A1W2PQC6 194 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 TCRBV5S1A1TA0A578 114 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 NPC1O15118 1278 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 APOEP02649 317 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 PABPC1P11940 636 aaKnown RBP21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 PBX1P40424 430 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 CXCR3P49682 368 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 IRAK1P51617 712 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 ATXN1P54253 815 aaKnown RBP21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 GSCP56915 257 aaPredicted RBP21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 SNX16P57768 344 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 CENPCQ03188 943 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 LMAN2Q12907 356 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 ZSCAN23Q3MJ62 389 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 C5orf22Q49AR2 442 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 PLA2G2CQ5R387 149 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 MMS22LQ6ZRQ5 1243 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 ZNF683Q8IZ20 524 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 CFAP52Q8N1V2 620 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 SLC30A5Q8TAD4 765 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 WFIKKN2Q8TEU8 576 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 TTC17Q96AE7 1141 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 SLC6A17Q9H1V8 727 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 SYNCQ9H7C4 482 aa21.35■■□□□ 1.01
PKNOX1-202ENST00000418336 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.35■■□□□ 1.017e-7■■■□□ 15
PKNOX1-202ENST00000418336 LAMA1P25391 3075 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 M0QYT0 321 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 ADCY5O95622 1261 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 CCR1P32246 355 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 COPAP53621 1224 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 SPEM2Q0P670 501 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 CLEC16AQ2KHT3 1053 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 SLC25A52Q3SY17 297 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 RAB6CQ53S08 254 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 FAM102AQ5T9C2 384 aaPredicted RBP21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 PMS2CLQ68D20 193 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 FBXL22Q6P050 247 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 CHST9Q7L1S5 443 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 LGI2Q8N0V4 545 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 AHI1Q8N157 1196 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 IGSF8Q969P0 613 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 ERLEC1Q96DZ1 483 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 TBCBQ99426 244 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 DDX50Q9BQ39 737 aaKnown RBP21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 RAB6CQ9H0N0 254 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 PDCL3Q9H2J4 239 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 GMEB2Q9UKD1 530 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 RAB23Q9ULC3 237 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 HS3ST4Q9Y661 456 aa21.34■■□□□ 1.01
PKNOX1-202ENST00000418336 SYNJ2BP-COX16A0A087WUM0 186 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 TIMM44O43615 452 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 LRP3O75074 770 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 ALDH1A2O94788 518 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 ENDOD1O94919 500 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 LUC7L3O95232 432 aaKnown RBP21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 NME3Q13232 169 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 USP39Q53GS9 565 aaKnown RBP21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 MBLAC2Q68D91 279 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 TRIM72Q6ZMU5 477 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 C14orf80Q86SX3 495 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 PHF13Q86YI8 300 aaPredicted RBP21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 MFN1Q8IWA4 741 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 ATP6V0D2Q8N8Y2 350 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 CYB5D2Q8WUJ1 264 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 MRGPRX3Q96LB0 322 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 MRGPRX1Q96LB2 322 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 PCMTD1Q96MG8 357 aaPredicted RBP21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 CIPCQ9C0C6 399 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 MKRN2Q9H000 416 aaKnown RBP21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 TMPRSS4Q9NRS4 437 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 RRN3Q9NYV6 651 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 COX16Q9P0S2 106 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 STIM2Q9P246 746 aa21.33■■□□□ 1.01
PKNOX1-202ENST00000418336 PAGE1O75459 146 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 GJB6O95452 261 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 SLC2A3P11169 496 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 GBP1P32455 592 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 GGCXP38435 758 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 RNASE9P60153 205 aaKnown RBP21.32■■□□□ 1
PKNOX1-202ENST00000418336 CXorf57Q6NSI4 855 aaKnown RBP21.32■■□□□ 1
PKNOX1-202ENST00000418336 MON1BQ7L1V2 547 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 CHSY1Q86X52 802 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 CIR1Q86X95 450 aaPredicted RBP21.32■■□□□ 1
PKNOX1-202ENST00000418336 OR52K2Q8NGK3 314 aa21.32■■□□□ 1
PKNOX1-202ENST00000418336 JOSD2Q8TAC2 188 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms