RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 USP33Q8TEY7 942 aa13.72□□□□□ -0.21
TGFBR3-203ENST00000417833 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
TGFBR3-203ENST00000417833 C11orf70Q9BRQ4 267 aa13.72□□□□□ -0.21
TGFBR3-203ENST00000417833 FAM204AQ9H8W3 233 aa13.72□□□□□ -0.21
TGFBR3-203ENST00000417833 DDIT4Q9NX09 232 aa13.72□□□□□ -0.21
TGFBR3-203ENST00000417833 MAP1BP46821 2468 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 TCRBV5S1A1TA0A578 114 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 TBC1D3BA6NDS4 549 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 GOLGA6L9A6NEM1 432 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 GOLGA8SH3BPF8 625 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 K7ESF4 209 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 ABCB4P21439 1286 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 HOXD9P28356 352 aaPredicted RBP13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 SLC6A4P31645 630 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 FLT3P36888 993 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 CXCR3P49682 368 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 NRLP54845 237 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 MS4A13Q5J8X5 152 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 ACBD5Q5T8D3 534 aaPredicted RBP13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 OTUD1Q5VV17 481 aaPredicted RBP13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 HGSNATQ68CP4 663 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 TRNP1Q6NT89 227 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 PKN3Q6P5Z2 889 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 MCOLN2Q8IZK6 566 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 CAMKK1Q8N5S9 505 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 C3orf20Q8ND61 904 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 RPLP0P6Q8NHW5 317 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 ACDQ96AP0 544 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 DLL3Q9NYJ7 618 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 PLK2Q9NYY3 685 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 PAXBP1Q9Y5B6 917 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 ATRXP46100 2492 aa13.71□□□□□ -0.21
TGFBR3-203ENST00000417833 CACNA1IQ9P0X4 2223 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 CCDC163A0A0D9SF12 145 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 GOLGA6L7A0A1B0GV03 622 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 C2CD4BA6NLJ0 364 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 SIGLEC16A6NMB1 481 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 TRIM24O15164 1050 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 TIMM44O43615 452 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 SERPING1P05155 500 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 KRT3P12035 628 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 CYLC1P35663 651 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 PTPN9P43378 593 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 SULT1E1P49888 294 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 SATB1Q01826 763 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 CSTF1Q05048 431 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 KDSRQ06136 332 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 NME3Q13232 169 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 E2F5Q15329 346 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 KIAA0907Q7Z7F0 614 aaPredicted RBP13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 CCAR2Q8N163 923 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 ZBTB44Q8NCP5 570 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 RNF34Q969K3 372 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 PRMT1Q99873 361 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 ADAM33Q9BZ11 813 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 WDCPQ9H6R7 721 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 METTL5Q9NRN9 209 aaKnown RBP13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 PIGVQ9NUD9 493 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 ARHGEF38Q9NXL2 777 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 CALCOCO1Q9P1Z2 691 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 MMP17Q9ULZ9 603 aa13.7□□□□□ -0.22
TGFBR3-203ENST00000417833 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 PRRT4C9JH25 899 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 KIF2AO00139 706 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.221e-20■■■■□ 23.6
TGFBR3-203ENST00000417833 NPC1O15118 1278 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 TSPAN3O60637 253 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 RTN2O75298 545 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 IPO7O95373 1038 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 LMNAP02545 664 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 TUBB4AP04350 444 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 HNRNPLP14866 589 aaKnown RBP eCLIP13.69□□□□□ -0.226e-10■□□□□ 8
TGFBR3-203ENST00000417833 TFE3P19532 575 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 DEUP1Q05D60 604 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 EIF4HQ15056 248 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 C5orf22Q49AR2 442 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 RFWD3Q6PCD5 774 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 STRADAQ7RTN6 431 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 TRMT11Q7Z4G4 463 aaKnown RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 SFTPA1Q8IWL2 248 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 IL17RCQ8NAC3 791 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 HJURPQ8NCD3 748 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 FIBINQ8TAL6 211 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 CENPIQ92674 756 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 BHMTQ93088 406 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 C1orf74Q96LT6 269 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 TBCBQ99426 244 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 SELENOOQ9BVL4 669 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 ISCUQ9H1K1 167 aa13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 RRAGDQ9NQL2 400 aaPredicted RBP13.69□□□□□ -0.22
TGFBR3-203ENST00000417833 C2orf42Q9NWW7 574 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms