RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 LRRC4Q9HBW1 653 aa17.01■□□□□ 0.31
PRPF18-203ENST00000417658 CFAP45Q9UL16 551 aa17.01■□□□□ 0.31
PRPF18-203ENST00000417658 SETXQ7Z333 2677 aaKnown RBP17.01■□□□□ 0.31
PRPF18-203ENST00000417658 COL5A1P20908 1838 aaPredicted RBP17■□□□□ 0.31
PRPF18-203ENST00000417658 SHROOM3Q8TF72 1996 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 PLK4O00444 970 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 JUPP14923 745 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 GALCP54803 685 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 ADAM9Q13443 819 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 C6orf118Q5T5N4 469 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 SCML4Q8N228 414 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 LSM14AQ8ND56 463 aaKnown RBP17■□□□□ 0.31
PRPF18-203ENST00000417658 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 NDRG1Q92597 394 aaKnown RBP17■□□□□ 0.31
PRPF18-203ENST00000417658 SEMA4DQ92854 862 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 CRELD1Q96HD1 420 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 IPO9Q96P70 1041 aaKnown RBP17■□□□□ 0.31
PRPF18-203ENST00000417658 DCBLD2Q96PD2 775 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 PABPC3Q9H361 631 aaKnown RBP17■□□□□ 0.31
PRPF18-203ENST00000417658 MMRN2Q9H8L6 949 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 ABCC13Q9NSE7 274 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 RAB20Q9NX57 234 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 FBXL12Q9NXK8 326 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 SFMBT1Q9UHJ3 866 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 RCOR1Q9UKL0 485 aa17■□□□□ 0.31
PRPF18-203ENST00000417658 MUC22E2RYF6 1773 aaPredicted RBP17■□□□□ 0.31
PRPF18-203ENST00000417658 BPTFQ12830 3046 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 ENC1O14682 589 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 IRAK2O43187 625 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 RNASEH1O60930 286 aaKnown RBP16.99■□□□□ 0.31
PRPF18-203ENST00000417658 RHOBTB3O94955 611 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 LDOC1O95751 146 aaPredicted RBP16.99■□□□□ 0.31
PRPF18-203ENST00000417658 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
PRPF18-203ENST00000417658 EIF2S3P41091 472 aaKnown RBP16.99■□□□□ 0.31
PRPF18-203ENST00000417658 IL9RQ01113 521 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 ARID5BQ14865 1188 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 PIK3R6Q5UE93 754 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 UNC45BQ8IWX7 931 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 KDM1BQ8NB78 822 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 ADAM32Q8TC27 787 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 KCTD13Q8WZ19 329 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 EDEM1Q92611 657 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 AZIN2Q96A70 460 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 TTC17Q96AE7 1141 aa16.99■□□□□ 0.31
PRPF18-203ENST00000417658 TPX2Q9ULW0 747 aaKnown RBP16.99■□□□□ 0.31
PRPF18-203ENST00000417658 LRRC72A6NJI9 287 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 YJEFN3A6XGL0 299 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 C10orf142B7Z368 130 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 E7ENQ6 273 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 TULP2O00295 520 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 YKT6O15498 198 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 ITGAVP06756 1048 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 CMA1P23946 247 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 CD70P32970 193 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 SLC11A2P49281 568 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 ST8SIA6P61647 398 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 BST2Q10589 180 aaKnown RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 RTP5Q14D33 572 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 HNRNPA1L2Q32P51 320 aaKnown RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 FOXD4L6Q3SYB3 417 aaPredicted RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 FOXD4L5Q5VV16 416 aaPredicted RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 FOXD4L3Q6VB84 417 aaPredicted RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 GATAD2AQ86YP4 633 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 GUF1Q8N442 669 aaKnown RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 FIBINQ8TAL6 211 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 PIP4K2CQ8TBX8 421 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 SAP25Q8TEE9 199 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 GANCQ8TET4 914 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 FOXD4L4Q8WXT5 416 aaPredicted RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 CCDC47Q96A33 483 aaKnown RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 MYO19Q96H55 970 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 CNDP2Q96KP4 475 aaKnown RBP16.98■□□□□ 0.31
PRPF18-203ENST00000417658 LMLNQ96KR4 655 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 NRSN2Q9GZP1 204 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 PRORYQ9H606 182 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 CNGB3Q9NQW8 809 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 HESX1Q9UBX0 185 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 ADAMTS1Q9UHI8 967 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 TSPAN16Q9UKR8 245 aa16.98■□□□□ 0.31
PRPF18-203ENST00000417658 FAM47DPA6NHR8 397 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 ATXN7O15265 892 aaPredicted RBP16.97■□□□□ 0.31
PRPF18-203ENST00000417658 STX10O60499 249 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 TBL1XO60907 577 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 RFPL3O75679 317 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 F13A1P00488 732 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 IGLV3-27P01718 113 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 ASLP04424 464 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 ABCB4P21439 1286 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 ITPKBP27987 946 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 CD38P28907 300 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 MXI1P50539 228 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 CCR5P51681 352 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 SGSHP51688 502 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 ADIGQ0VDE8 80 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 SHBQ15464 509 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 GOLGA7BQ2TAP0 167 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 SGO2Q562F6 1265 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 PRAMEF14Q5SWL7 426 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 NUGGCQ68CJ6 796 aa16.97■□□□□ 0.31
PRPF18-203ENST00000417658 MSANTD2Q6P1R3 559 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms