RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 FERMT1Q9BQL6 677 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 S100A14Q9HCY8 104 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 EMCNQ9ULC0 261 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 FZD1Q9UP38 647 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 DNAJC16Q9Y2G8 782 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 LTBP3Q9NS15 1303 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 A0A0A0MRY4 1105 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 NFKBIEO00221 500 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 ADCY6O43306 1168 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 PGAM1P18669 254 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 HARS2P49590 506 aaKnown RBP10.07□□□□□ -0.8
CD44-206ENST00000415148 RGS7P49802 495 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 CDK7P50613 346 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 GBE1Q04446 702 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 BTKQ06187 659 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 PDE1CQ14123 709 aaPredicted RBP10.07□□□□□ -0.8
CD44-206ENST00000415148 N4BP2L1Q5TBK1 243 aaPredicted RBP10.07□□□□□ -0.8
CD44-206ENST00000415148 RASIP1Q5U651 963 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 PGM2L1Q6PCE3 622 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 FBXL19Q6PCT2 694 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 SLC26A9Q7LBE3 791 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 LINC01465Q8N7H1 131 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 C12orf29Q8N999 325 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 HTR3CQ8WXA8 447 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 SPATA13Q96N96 652 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 OLFM3Q96PB7 478 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 DHX35Q9H5Z1 703 aaKnown RBP10.07□□□□□ -0.8
CD44-206ENST00000415148 PLEKHA5Q9HAU0 1116 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 PIH1D1Q9NWS0 290 aaKnown RBP10.07□□□□□ -0.8
CD44-206ENST00000415148 AP4E1Q9UPM8 1137 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 TBC1D30Q9Y2I9 924 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 GJA3Q9Y6H8 435 aa10.07□□□□□ -0.8
CD44-206ENST00000415148 A0A087WZ62 844 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 ARHGAP42A6NI28 874 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 USP2O75604 605 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 ALDOAP04075 364 aaKnown RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 PIM1P11309 404 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 CCDC130P13994 396 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 ARF4P18085 180 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 KCNA4P22459 653 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 GARSP41250 739 aaKnown RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 COPAP53621 1224 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 RPL10AP62906 217 aaKnown RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 DEUP1Q05D60 604 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 CCDC153Q494R4 210 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 LIN52Q52LA3 116 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 CFAP157Q5JU67 520 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 GRTP1Q5TC63 336 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 DPY19L2Q6NUT2 758 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 STRADAQ7RTN6 431 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 PDSS2Q86YH6 399 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 NETO2Q8NC67 525 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 ACTRT2Q8TDY3 377 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 EZH1Q92800 747 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 CSPG4P5Q96PW8 444 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 FDXACB1Q9BRP7 624 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 CYP4F11Q9HBI6 524 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 XPNPEP3Q9NQH7 507 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 PNPOQ9NVS9 261 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 MTMR10Q9NXD2 777 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 DTLQ9NZJ0 730 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 SSX2IPQ9Y2D8 614 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 MYO18AQ92614 2054 aaKnown RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 COL1A2P08123 1366 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 BPTFQ12830 3046 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 DNAJC25-GNG10A0A024R161 153 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 WDR27A2RRH5 827 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 TPP1O14773 563 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 IRF6O14896 467 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 OPHN1O60890 802 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 SIN3BO75182 1162 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 GABBR2O75899 941 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 PROCP04070 461 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 MX2P20592 715 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 GRM5P41594 1212 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 ACADSBP45954 432 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 GLUD2P49448 558 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 IDH3AP50213 366 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 CRADDP78560 199 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 FRG1Q14331 258 aaKnown RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 PCLAFQ15004 111 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 TBC1D25Q3MII6 688 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 TCHHL1Q5QJ38 904 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 METTL21CQ5VZV1 264 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 NCBP2-AS2Q69YL0 99 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 SATL1Q86VE3 508 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 COLGALT1Q8NBJ5 622 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 OR6Y1Q8NGX8 325 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 B4GALNT2Q8NHY0 566 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 ISL2Q96A47 359 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 OXCT2Q9BYC2 517 aaPredicted RBP10.06□□□□□ -0.8
CD44-206ENST00000415148 GGA3Q9NZ52 723 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 ADAM28Q9UKQ2 775 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 USP3Q9Y6I4 520 aa10.06□□□□□ -0.8
CD44-206ENST00000415148 TRIP11Q15643 1979 aa10.05□□□□□ -0.8
CD44-206ENST00000415148 SF3B1O75533 1304 aaKnown RBP eCLIP10.05□□□□□ -0.88e-6■■■■■ 107
CD44-206ENST00000415148 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.05□□□□□ -0.8
CD44-206ENST00000415148 MYOCOSA0A1B0GUC4 107 aa10.05□□□□□ -0.8
CD44-206ENST00000415148 PRKCGP05129 697 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms