RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 PLA2G4CQ9UP65 541 aa17.41■□□□□ 0.38
SF1-207ENST00000413951 WASF3Q9UPY6 502 aa17.41■□□□□ 0.38
SF1-207ENST00000413951 PCDHB9Q9Y5E1 797 aa17.41■□□□□ 0.38
SF1-207ENST00000413951 CHD8Q9HCK8 2581 aa17.41■□□□□ 0.38
SF1-207ENST00000413951 MYO18AQ92614 2054 aaKnown RBP17.4■□□□□ 0.38
SF1-207ENST00000413951 WASH3PC4AMC7 463 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 RNF225M0QZC1 329 aaPredicted RBP17.4■□□□□ 0.38
SF1-207ENST00000413951 IL12RB1P42701 662 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 JAM2P57087 298 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 IL27RAQ6UWB1 636 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 SERPINA13PQ6UXR4 307 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 FMNL3Q8IVF7 1028 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 FAM71AQ8IYT1 594 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 RBBP8NLQ8NC74 664 aaPredicted RBP17.4■□□□□ 0.38
SF1-207ENST00000413951 DNASE2BQ8WZ79 361 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 TOE1Q96GM8 510 aaKnown RBP17.4■□□□□ 0.38
SF1-207ENST00000413951 XPO4Q9C0E2 1151 aaKnown RBP17.4■□□□□ 0.38
SF1-207ENST00000413951 TTYH3Q9C0H2 523 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 WSB2Q9NYS7 404 aaPredicted RBP17.4■□□□□ 0.38
SF1-207ENST00000413951 PCDHB4Q9Y5E5 795 aa17.4■□□□□ 0.38
SF1-207ENST00000413951 MAP1BP46821 2468 aaKnown RBP17.39■□□□□ 0.37
SF1-207ENST00000413951 F8VZ95 297 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 IGLV3-19P01714 112 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 NCAM1P13591 858 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 ZNF234Q14588 700 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 DRAP1Q14919 205 aaPredicted RBP17.39■□□□□ 0.37
SF1-207ENST00000413951 FIGNQ5HY92 759 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 ADGRF1Q5T601 910 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 BSPRYQ5W0U4 402 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 UNC45BQ8IWX7 931 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 NEK11Q8NG66 645 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 IRGQQ8WZA9 623 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 TMA16Q96EY4 203 aaKnown RBP17.39■□□□□ 0.37
SF1-207ENST00000413951 ZSWIM1Q9BR11 485 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 STOML2Q9UJZ1 356 aa17.39■□□□□ 0.37
SF1-207ENST00000413951 TNRC6BQ9UPQ9 1833 aaKnown RBP17.38■□□□□ 0.37
SF1-207ENST00000413951 LAMA1P25391 3075 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 C1QTNF9BB2RNN3 333 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 FOXN3O00409 490 aaPredicted RBP17.38■□□□□ 0.37
SF1-207ENST00000413951 IRAK2O43187 625 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 ATP5BP06576 529 aaKnown RBP17.38■□□□□ 0.37
SF1-207ENST00000413951 TPM3P06753 285 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 EPHX1P07099 455 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 C1QTNF9P0C862 333 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 SLC11A2P49281 568 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 TPMTP51580 245 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 POLR2FP61218 127 aaKnown RBP17.38■□□□□ 0.37
SF1-207ENST00000413951 ZBTB16Q05516 673 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 ADIGQ0VDE8 80 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 ARHGAP44Q17R89 818 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 MPP7Q5T2T1 576 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 NUGGCQ68CJ6 796 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 AHI1Q8N157 1196 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 DDX50Q9BQ39 737 aaKnown RBP17.38■□□□□ 0.37
SF1-207ENST00000413951 GPR174Q9BXC1 333 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 MKRN2Q9H000 416 aaKnown RBP17.38■□□□□ 0.37
SF1-207ENST00000413951 MSRB2Q9Y3D2 182 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 ITIH6Q6UXX5 1313 aa17.38■□□□□ 0.37
SF1-207ENST00000413951 TYW5A2RUC4 315 aaKnown RBP17.37■□□□□ 0.37
SF1-207ENST00000413951 METTL12A8MUP2 240 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 O00370 1275 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 CER1O95813 267 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 SFSWAPQ12872 951 aaKnown RBP17.37■□□□□ 0.37
SF1-207ENST00000413951 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 MEA1Q16626 185 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 LCLAT1Q6UWP7 414 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 CCDC117Q8IWD4 279 aaPredicted RBP17.37■□□□□ 0.37
SF1-207ENST00000413951 OR2T3Q8NH03 318 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 TFAP2BQ92481 460 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 BAP1Q92560 729 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 TRIM62Q9BVG3 475 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 EDEM3Q9BZQ6 932 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 SLC6A17Q9H1V8 727 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 ZMIZ1Q9ULJ6 1067 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 MYO6Q9UM54 1294 aa17.37■□□□□ 0.37
SF1-207ENST00000413951 SPAARA0A1B0GVQ0 90 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 BCAT2O15382 392 aaPredicted RBP17.36■□□□□ 0.37
SF1-207ENST00000413951 SART1O43290 800 aaKnown RBP17.36■□□□□ 0.37
SF1-207ENST00000413951 FBXO21O94952 628 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 ZNF883P0CG24 379 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 PNMA6AP0CW24 399 aaPredicted RBP17.36■□□□□ 0.37
SF1-207ENST00000413951 KRT5P13647 590 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 CD59P13987 128 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 HOXD9P28356 352 aaPredicted RBP17.36■□□□□ 0.37
SF1-207ENST00000413951 CLCN1P35523 988 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 TRIP6Q15654 476 aaKnown RBP17.36■□□□□ 0.37
SF1-207ENST00000413951 CNGA2Q16280 664 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 PKDCCQ504Y2 493 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 FNDC3BQ53EP0 1204 aaKnown RBP17.36■□□□□ 0.37
SF1-207ENST00000413951 DCAF12L1Q5VU92 463 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.36■□□□□ 0.37
SF1-207ENST00000413951 UBA3Q8TBC4 463 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 AZIN2Q96A70 460 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 IQCDQ96DY2 449 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 ERLEC1Q96DZ1 483 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 HSFY1Q96LI6 401 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 PCMTD1Q96MG8 357 aaPredicted RBP17.36■□□□□ 0.37
SF1-207ENST00000413951 MIR1-1HGQ9H1L0 117 aa17.36■□□□□ 0.37
SF1-207ENST00000413951 FSCN3Q9NQT6 498 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms