RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
LITAF-203ENST00000413364 RPL9P32969 192 aaKnown RBP13.4□□□□□ -0.26
LITAF-203ENST00000413364 THPOP40225 353 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 LHX1P48742 406 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 ATXN1P54253 815 aaKnown RBP13.4□□□□□ -0.26
LITAF-203ENST00000413364 OCRLQ01968 901 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 RCN2Q14257 317 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 KCNA10Q16322 511 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 WASHC2DQ5SRD0 308 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 SCUBE1Q8IWY4 988 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 TAB3Q8N5C8 712 aaPredicted RBP13.4□□□□□ -0.26
LITAF-203ENST00000413364 KLHDC9Q8NEP7 349 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 UCMAQ8WVF2 138 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 MAML1Q92585 1016 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 ELAC2Q9BQ52 826 aaKnown RBP13.4□□□□□ -0.26
LITAF-203ENST00000413364 MED10Q9BTT4 135 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
LITAF-203ENST00000413364 UBAP1Q9NZ09 502 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 XPO7Q9UIA9 1087 aaKnown RBP13.4□□□□□ -0.26
LITAF-203ENST00000413364 HEY1Q9Y5J3 304 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 ACTL7BQ9Y614 415 aa13.4□□□□□ -0.26
LITAF-203ENST00000413364 TMEM120BA0PK00 339 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 BANF1O75531 89 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 BEST1O76090 585 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CREB1P16220 341 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 GCAP28676 217 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 ACADVLP49748 655 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CLCNKBP51801 687 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 NRLP54845 237 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 ADARP55265 1226 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 GPX6P59796 221 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 BASP1P80723 227 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 MRPS5P82675 430 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 NR1H3Q13133 447 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 RCN1Q15293 331 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 SLC25A52Q3SY17 297 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 MSS51Q4VC12 460 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 LIN52Q52LA3 116 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CLEC20AQ6ZU45 233 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CCNJLQ8IV13 435 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 ANKMY2Q8IV38 441 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 DEFB106AQ8N104 65 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 DQX1Q8TE96 717 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 HHIPL1Q96JK4 782 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CRTAC1Q9NQ79 661 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 MTMR10Q9NXD2 777 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 PAK5Q9P286 719 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 HSFX1Q9UBD0 423 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 TBK1Q9UHD2 729 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 PADI3Q9ULW8 664 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 USP15Q9Y4E8 981 aaPredicted RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 CLUHO75153 1309 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 FOXO6A8MYZ6 492 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 KCNN4O15554 427 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 ZNF623O75123 536 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 BRAFP15056 766 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 TSHRP16473 764 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CST5P28325 142 aaPredicted RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 CD52P31358 61 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 SCNN1GP51170 649 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 YWHAZP63104 245 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 SPIDRQ14159 915 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 RASA2Q15283 850 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CCDC153Q494R4 210 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 PDIK1LQ8N165 341 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.27
LITAF-203ENST00000413364 CCDC185Q8N715 623 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 NDRG1Q92597 394 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 ABTB1Q969K4 478 aaPredicted RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 FAM149B1Q96BN6 582 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 NUDCD1Q96RS6 583 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 PRMT1Q99873 361 aaKnown RBP13.39□□□□□ -0.27
LITAF-203ENST00000413364 SIKE1Q9BRV8 207 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 LRRC4Q9HBW1 653 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 RXFP1Q9HBX9 757 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 INIPQ9NRY2 104 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 KRT82Q9NSB4 513 aa13.39□□□□□ -0.27
LITAF-203ENST00000413364 CHADO15335 359 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 SNX3O60493 162 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 TPPPO94811 219 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 ZBED1O96006 694 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 RBL1P28749 1068 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 CCND3P30281 292 aaPredicted RBP13.38□□□□□ -0.27
LITAF-203ENST00000413364 PHBP35232 272 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 SULT1E1P49888 294 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 GEMIN4P57678 1058 aaKnown RBP13.38□□□□□ -0.27
LITAF-203ENST00000413364 DSC3Q14574 896 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 KCNJ11Q14654 390 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 TMED2Q15363 201 aa13.38□□□□□ -0.27
LITAF-203ENST00000413364 PSTKQ8IV42 348 aaKnown RBP13.38□□□□□ -0.27
LITAF-203ENST00000413364 CDKL3Q8IVW4 592 aaPredicted RBP13.38□□□□□ -0.27
LITAF-203ENST00000413364 SIX6OS1Q8N1H7 587 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms