RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 HOXB2P14652 356 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 ABCB4P21439 1286 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 CCR1P32246 355 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 IRAK1P51617 712 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 ATP11AP98196 1134 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 DEUP1Q05D60 604 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 ASIC2Q16515 512 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 FSCBQ5H9T9 825 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 SH3PXD2AQ5TCZ1 1133 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 TRIM72Q6ZMU5 477 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 CHST9Q7L1S5 443 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 C14orf80Q86SX3 495 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 MFN1Q8IWA4 741 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 FRMD1Q8N878 549 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 ATP6V0D2Q8N8Y2 350 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 HJURPQ8NCD3 748 aaPredicted RBP13.61□□□□□ -0.23
SSB-203ENST00000413002 OLIG1Q8TAK6 271 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 CYB5D2Q8WUJ1 264 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 RLN3Q8WXF3 142 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 DDX50Q9BQ39 737 aaKnown RBP13.61□□□□□ -0.23
SSB-203ENST00000413002 SLC2A11Q9BYW1 496 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 TTYH3Q9C0H2 523 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 SIK2Q9H0K1 926 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 SLC6A17Q9H1V8 727 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 ELOVL2Q9NXB9 296 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 ADAM22Q9P0K1 906 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 BCCIPQ9P287 314 aaKnown RBP eCLIP13.61□□□□□ -0.23
SSB-203ENST00000413002 SLC12A6Q9UHW9 1150 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 GGA2Q9UJY4 613 aa13.61□□□□□ -0.23
SSB-203ENST00000413002 EP300Q09472 2414 aaPredicted RBP13.61□□□□□ -0.23
SSB-203ENST00000413002 PAGE1O75459 146 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 RPP40O75818 363 aaKnown RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 CAVIN2O95810 425 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 PABPC1P11940 636 aaKnown RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 PBX1P40424 430 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 IL12RB1P42701 662 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 ZNF445P59923 1031 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 CENPCQ03188 943 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 ZNF234Q14588 700 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 CDO1Q16878 200 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 C15orf59Q2T9L4 293 aaPredicted RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 SDE2Q6IQ49 451 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 FBXL22Q6P050 247 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 LRSAM1Q6UWE0 723 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 ADIPOR2Q86V24 386 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 KBTBD6Q86V97 674 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 FAM160A2Q8N612 972 aaPredicted RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 ZNF366Q8N895 744 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 GAB3Q8WWW8 586 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 RXFP2Q8WXD0 754 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 IGSF8Q969P0 613 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 NT5C3BQ969T7 300 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 PRMT1Q99873 361 aaKnown RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 SYT11Q9BT88 431 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 XPO4Q9C0E2 1151 aaKnown RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 TKTL2Q9H0I9 626 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 HAUS4Q9H6D7 363 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 WDCPQ9H6R7 721 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 POLMQ9NP87 494 aaPredicted RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 THAP10Q9P2Z0 257 aaPredicted RBP13.6□□□□□ -0.23
SSB-203ENST00000413002 VANGL2Q9ULK5 521 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 STAP1Q9ULZ2 295 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 HS3ST4Q9Y661 456 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
SSB-203ENST00000413002 F5H5T6 163 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 H0Y626 953 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 ALDH1A2O94788 518 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 CCDC172P0C7W6 258 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 SLC2A3P11169 496 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 HLA-EP13747 358 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 GABRG2P18507 467 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 PRKCHP24723 683 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 SCNN1AP37088 669 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 CXCR3P49682 368 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 LMAN2Q12907 356 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 CDH18Q13634 790 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 AUHQ13825 339 aaKnown RBP13.59□□□□□ -0.23
SSB-203ENST00000413002 SLC25A52Q3SY17 297 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 FUT11Q495W5 492 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 HSF5Q4G112 596 aaPredicted RBP13.59□□□□□ -0.23
SSB-203ENST00000413002 MPP7Q5T2T1 576 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 MBLAC2Q68D91 279 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 ZNF571Q7Z3V5 609 aaPredicted RBP13.59□□□□□ -0.23
SSB-203ENST00000413002 TRMT11Q7Z4G4 463 aaKnown RBP13.59□□□□□ -0.23
SSB-203ENST00000413002 RASSF3Q86WH2 238 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 FAM131BQ86XD5 332 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 PHF13Q86YI8 300 aaPredicted RBP13.59□□□□□ -0.23
SSB-203ENST00000413002 KCNV2Q8TDN2 545 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 RPRD1AQ96P16 312 aaPredicted RBP13.59□□□□□ -0.23
SSB-203ENST00000413002 GABRG3Q99928 467 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 NCDNQ9UBB6 729 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 EBF1Q9UH73 591 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
SSB-203ENST00000413002 RAB23Q9ULC3 237 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 MYO6Q9UM54 1294 aa13.59□□□□□ -0.23
SSB-203ENST00000413002 PTPRZ1P23471 2315 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms