RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CXorf36Q9H7Y0 433 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 KAT14Q9H8E8 782 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 MARCH4Q9P2E8 410 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 WDR35Q9P2L0 1181 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 SLCO3A1Q9UIG8 710 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 RCE1Q9Y256 329 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 CCL27Q9Y4X3 112 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 RAD54BQ9Y620 910 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 COL15A1P39059 1388 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 K7ESM1 405 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 PSMA7O14818 248 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 GPR42O15529 346 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 CTIFO43310 598 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 SLU7O95391 586 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 EIF2S1P05198 315 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 RARGP13631 454 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 ACP5P13686 325 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 CHRM3P20309 590 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 SAT1P21673 171 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 SLC6A2P23975 617 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 PRKAR1BP31321 381 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 HTR7P34969 479 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 GSTM5P46439 218 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 GCLCP48506 637 aaPredicted RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 LMAN1P49257 510 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 CTCFP49711 727 aaPredicted RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 HSD17B4P51659 736 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 NPEPPSP55786 919 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 ADAM8P78325 824 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 RBM6P78332 1123 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 GOLGA8FQ08AF8 430 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 TNFAIP1Q13829 316 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 NFYCQ13952 458 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 IRF3Q14653 427 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 USP10Q14694 798 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 NTRK2Q16620 822 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 BMT2Q1RMZ1 405 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 TMEM196Q5HYL7 178 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 ERMARDQ5T6L9 678 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 AGBL4Q5VU57 503 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 KLHL35Q6PF15 583 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 ARHGEF18Q6ZSZ5 1173 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 RALYLQ86SE5 291 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 ADGRA1Q86SQ6 560 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 UNC45BQ8IWX7 931 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 CFAP52Q8N1V2 620 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 FSTL5Q8N475 847 aaPredicted RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 ARL6IP6Q8N6S5 226 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 Q8NFD4 153 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 TNIP2Q8NFZ5 429 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 GABPB2Q8TAK5 448 aaPredicted RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 PIGOQ8TEQ8 1089 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 POMGNT1Q8WZA1 660 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 ARHGEF2Q92974 986 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 TSPAN18Q96SJ8 248 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 EIF3CQ99613 913 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 TLR10Q9BXR5 811 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 GBA2Q9HCG7 927 aaPredicted RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 MPP6Q9NZW5 540 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 C5AR2Q9P296 337 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 SUCLA2Q9P2R7 463 aaPredicted RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 EPS15L1Q9UBC2 864 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 CDYLQ9Y232 598 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 OSGIN2Q9Y236 505 aa5.26□□□□□ -1.57
LSM5-205ENST00000409952 MRPS17Q9Y2R5 130 aaKnown RBP5.26□□□□□ -1.57
LSM5-205ENST00000409952 AGAP5A6NIR3 686 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 C16orf96A6NNT2 1141 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 TBKBP1A7MCY6 615 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ADM5C9JUS6 153 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 GCOM1H8Y6P7 765 aaPredicted RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 AGPSO00116 658 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 TAF4O00268 1085 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 RTCAO00442 366 aaKnown RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 MUSKO15146 869 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 B4GALT4O60513 344 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 MT-ND3P03897 115 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ADRB1P08588 477 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ZNF888P0CJ79 500 aaPredicted RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 THEGLP0DJG4 465 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 COX7A2P14406 83 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 UQCRC1P31930 480 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 THBS4P35443 961 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 KRT2P35908 639 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 CPA2P48052 419 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 GATMP50440 423 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ZNF131P52739 623 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 FAM3BP58499 235 aaPredicted RBP5.25□□□□□ -1.57
LSM5-205ENST00000409952 UFM1P61960 85 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 PRAMEP78395 509 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 TIAL1Q01085 375 aaKnown RBP eCLIP5.25□□□□□ -1.57
LSM5-205ENST00000409952 SLFN5Q08AF3 891 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 CCNIQ14094 377 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 CLCA4Q14CN2 919 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 NAA25Q14CX7 972 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ACOX1Q15067 660 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 AAK1Q2M2I8 961 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 ANKS6Q68DC2 871 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 TTI2Q6NXR4 508 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 TAPT1Q6NXT6 567 aa5.25□□□□□ -1.57
LSM5-205ENST00000409952 TATDN1Q6P1N9 297 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms