RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TBC1D14Q9P2M4 693 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 FZD10Q9ULW2 581 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 JRKLQ9Y4A0 524 aa17.1■□□□□ 0.33
TSPAN4-208ENST00000409531 MAN2B1O00754 1011 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 SLC9A3R1O14745 358 aaPredicted RBP17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 FTCDO95954 541 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 CTNNA1P35221 906 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 GNG11P61952 73 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 ZXDBP98169 803 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 ZNF77Q15935 545 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 ZNF852Q6ZMS4 543 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 DENND1CQ8IV53 801 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 CCDC185Q8N715 623 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 SNRNP25Q9BV90 132 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 OSBPL6Q9BZF3 934 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 AP4E1Q9UPM8 1137 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 MRPS17Q9Y2R5 130 aaKnown RBP17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 HYOU1Q9Y4L1 999 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 F5P12259 2224 aa17.09■□□□□ 0.33
TSPAN4-208ENST00000409531 ACSL4O60488 711 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 TUBB4AP04350 444 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 TNNT1P13805 278 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 CD72P21854 359 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 CTNNA2P26232 953 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 IL1R2P27930 398 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 GJC1P36383 396 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 ZNF135P52742 658 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 TAS2R40P59535 323 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 NHLH1Q02575 133 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 ADGRF1Q5T601 910 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 MEI1Q5TIA1 1274 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 Q6ZNB5 142 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 CPNE8Q86YQ8 564 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 CD101Q93033 1021 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 OTUB2Q96DC9 234 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 C1orf74Q96LT6 269 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 PEBP4Q96S96 227 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 FOXQ1Q9C009 403 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 OSBPL2Q9H1P3 480 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 C8orf33Q9H7E9 229 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 GTSE1Q9NYZ3 720 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 PIAS3Q9Y6X2 628 aa17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 KIF26AQ9ULI4 1882 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-208ENST00000409531 DOCK4Q8N1I0 1966 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 SHISA7A6NL88 538 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 FAM170BA6NMN3 283 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 KIF2AO00139 706 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 PAGE1O75459 146 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 KLKB1P03952 638 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 RARAP10276 462 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 TCF4P15884 667 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 CHKAP35790 457 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 UBXN2BQ14CS0 331 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 RPS6KA1Q15418 735 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 SMTNL2Q2TAL5 461 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 C1orf228Q6PIY5 440 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 CYP4V2Q6ZWL3 525 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 MAP7D3Q8IWC1 876 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 SLC35F6Q8N357 371 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 PJA1Q8NG27 643 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 RIN3Q8TB24 985 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 HSPH1Q92598 858 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 MSANTD3Q96H12 275 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 HES6Q96HZ4 224 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 DHX35Q9H5Z1 703 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 OR12D3Q9UGF7 316 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 STOML2Q9UJZ1 356 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 AGO1Q9UL18 857 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 PCDHA3Q9Y5H8 950 aa17.07■□□□□ 0.32
TSPAN4-208ENST00000409531 NCAM2O15394 837 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 GREM1O60565 184 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 HTR7P34969 479 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 RWDD2BP57060 319 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 ETF1P62495 437 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 NRG1Q02297 640 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 TNK2Q07912 1038 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 RUNX3Q13761 415 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 PDK2Q15119 407 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 PDGFRLQ15198 375 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 DPYSL2Q16555 572 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 ITPRIPL2Q3MIP1 535 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 MS4A13Q5J8X5 152 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 KCNT1Q5JUK3 1230 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 LRRC31Q6UY01 552 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 RALGPS2Q86X27 583 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 KATNAL2Q8IYT4 538 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 CPXM2Q8N436 756 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 KCTD6Q8NC69 237 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 OSCP1Q8WVF1 389 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 FAM3CQ92520 227 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 EPAS1Q99814 870 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 SIK2Q9H0K1 926 aa17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 DUS2Q9NX74 493 aaKnown RBP17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 MTF2Q9Y483 593 aaPredicted RBP17.06■□□□□ 0.32
TSPAN4-208ENST00000409531 HS3ST4Q9Y661 456 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms