RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 MRPS23Q9Y3D9 190 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 PHRF1Q9P1Y6 1649 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 CCDC78A2IDD5 438 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 C5orf58C9J3I9 102 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 TM9SF1O15321 606 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 MMP13P45452 471 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 NOMO3P69849 1222 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 SGCGQ13326 291 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 STRADAQ7RTN6 431 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 DNAAF5Q86Y56 855 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 TMEM139Q8IV31 216 aa17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 C2orf15Q8WU43 125 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.2■□□□□ 0.34
PCDHA13-202ENST00000409494 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 FGBP02675 491 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 COL6A1P12109 1028 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 ELNP15502 786 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 SMPD1P17405 629 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 AMPD1P23109 780 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 CRABP2P29373 138 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 STX5Q13190 355 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 SLC45A4Q5BKX6 768 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 LCLAT1Q6UWP7 414 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 OR5B17Q8NGF7 314 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 RCOR3Q9P2K3 495 aaPredicted RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 RNF112Q9ULX5 631 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 EFR3BQ9Y2G0 817 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 EIF4E1BA6NMX2 242 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 TISP43B9A030 160 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 TLL1O43897 1013 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 SNRPD1P62314 119 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 CAMK2GQ13555 558 aaPredicted RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 RBBP8Q99708 897 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 ZYG11BQ9C0D3 744 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 ZMYM5Q9UJ78 669 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 EIF3LQ9Y262 564 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 CDH2P19022 906 aaPredicted RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 SKOR1P84550 965 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 KCNT2Q6UVM3 1135 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 FAM35AQ86V20 835 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 TRIML2Q8N7C3 387 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 BHMTQ93088 406 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 SRRDQ9UH36 339 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 QSOX1O00391 747 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 IFRD1O00458 451 aaPredicted RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 TPBGLP0DKB5 382 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 PBX1P40424 430 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 PPP3CCP48454 512 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 KDSRQ06136 332 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 KCNMA1Q12791 1236 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 SPDYE7PQ495Y7 208 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 PSTKQ8IV42 348 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 APOL5Q9BWW9 433 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 CDC42EP4Q9H3Q1 356 aaKnown RBP17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 USP20Q9Y2K6 914 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 HES2Q9Y543 173 aa17.19■□□□□ 0.34
PCDHA13-202ENST00000409494 ZNF839A8K0R7 811 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 EVPLLA8MZ36 301 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 RNF103O00237 685 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 GLUD1P00367 558 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 TYMPP19971 482 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 MRPS5P82675 430 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 DGKZQ13574 1117 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 KRT72Q14CN4 511 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 TSEN2Q8NCE0 465 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 COG4Q9H9E3 785 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 CD248Q9HCU0 757 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 SMPD4Q9NXE4 827 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 NCKIPSDQ9NZQ3 722 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 DYRK1BQ9Y463 629 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 B4GALT5O43286 388 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 TNFSF9P41273 254 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 FSTL1Q12841 308 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 CACHD1Q5VU97 1274 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 TMC3Q7Z5M5 1100 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 WDR41Q9HAD4 459 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 STX18Q9P2W9 335 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 ANKRD6Q9Y2G4 727 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 ENO1P06733 434 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 PYGMP11217 842 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 RFX8Q6ZV50 586 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 STRA8Q7Z7C7 330 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 ARMC2Q8NEN0 867 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 BAP1Q92560 729 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 TBC1D14Q9P2M4 693 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 PMM2O15305 246 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 KCNK10P57789 538 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 ZNF844Q08AG5 666 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 USP45Q70EL2 814 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 IARS2Q9NSE4 1012 aaKnown RBP17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 SELENONQ9NZV5 590 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 COL20A1Q9P218 1284 aa17.18■□□□□ 0.34
PCDHA13-202ENST00000409494 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 LGR5O75473 907 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 PIK3CGP48736 1102 aa17.17■□□□□ 0.34
PCDHA13-202ENST00000409494 FMO1Q01740 532 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms