RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 DEC1Q9P2X7 70 aa10.09□□□□□ -0.79
NIF3L1-202ENST00000409020 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
NIF3L1-202ENST00000409020 AGO1Q9UL18 857 aaKnown RBP10.09□□□□□ -0.79
NIF3L1-202ENST00000409020 EPG5Q9HCE0 2579 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 ATXN2Q99700 1313 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 MED19A0JLT2 244 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 BICDL2A1A5D9 508 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 GOLGA6L10A6NI86 522 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 GOLGA6L19H0YKK7 550 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 MSI1O43347 362 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 CACNG3O60359 315 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 TPPPO94811 219 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 AFPP02771 609 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 PYGLP06737 847 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 FESP07332 822 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 CISD3P0C7P0 127 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 RALAP11233 206 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 TBXAS1P24557 533 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 ATXN1P54253 815 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 MARSP56192 900 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 MRPS21P82921 87 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 BST2Q10589 180 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 NAA30Q147X3 362 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 FYB2Q5VWT5 728 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 BTBD8Q5XKL5 378 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 FOXR2Q6PJQ5 311 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 LCLAT1Q6UWP7 414 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 PRR23CQ6ZRP0 262 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 RASSF3Q86WH2 238 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 DENND1CQ8IV53 801 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 MAGEC3Q8TD91 643 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 MARK1Q9P0L2 795 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 SFMBT1Q9UHJ3 866 aa10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 LSM7Q9UK45 103 aaKnown RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 AJAP1Q9UKB5 411 aaPredicted RBP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.08□□□□□ -0.8
NIF3L1-202ENST00000409020 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 SLC12A8A0AV02 714 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 WASH3PC4AMC7 463 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 M0QYV0 167 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 EPN2O95208 641 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 STIP1P31948 543 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 PPP1R2P41236 205 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 TNFRSF4P43489 277 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 DAOAP59103 153 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 CSRP2Q16527 193 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 HSP90AA4PQ58FG1 418 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 BSPRYQ5W0U4 402 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 GRAMD4Q6IC98 578 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 RSRC2Q7L4I2 434 aaKnown RBP10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 DGLUCYQ7Z3D6 616 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 ZNF276Q8N554 614 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 B4GALNT2Q8NHY0 566 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 SLC35F5Q8WV83 523 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 HMGB4Q8WW32 186 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 OSBPL9Q96SU4 736 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 SLC6A17Q9H1V8 727 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 FAM124BQ9H5Z6 455 aaPredicted RBP10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 LRRC4Q9HBW1 653 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 CD93Q9NPY3 652 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 HESX1Q9UBX0 185 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 CYTH4Q9UIA0 394 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 RAD54BQ9Y620 910 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 SPAG17Q6Q759 2223 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 ABCA7Q8IZY2 2146 aa10.07□□□□□ -0.8
NIF3L1-202ENST00000409020 CNOT1A5YKK6 2376 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 A0A1W2PQF6 199 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 TCRBV21S2A2A0A5A6 115 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 DCDC2BA2VCK2 349 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 P4HA2O15460 535 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 PAEPP09466 180 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 SLC9A1P19634 815 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 SGSHP51688 502 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 CLNS1AP54105 237 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 YWHAEP62258 255 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 ZBED6P86452 979 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 GCNT1Q02742 428 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 LMNB2Q03252 620 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 GOLGA8FQ08AF8 430 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 GOLGA8DPQ0D2H9 430 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 GEN1Q17RS7 908 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 DPCR1Q3MIW9 517 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 KIAA1211LQ6NV74 962 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 DENND1BQ6P3S1 775 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 SIX6OS1Q8N1H7 587 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 TRIML1Q8N9V2 468 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 OLIG1Q8TAK6 271 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 KCTD13Q8WZ19 329 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 ZC3H10Q96K80 434 aaKnown RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 DNAI2Q9GZS0 605 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 CLSTN2Q9H4D0 955 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 CD248Q9HCU0 757 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 KCND1Q9NSA2 647 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 CACNA2D2Q9NY47 1150 aa10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 MBD1Q9UIS9 605 aaPredicted RBP10.06□□□□□ -0.8
NIF3L1-202ENST00000409020 METRNQ9UJH8 293 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms