RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CXCR3P49682 368 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 PTPN5P54829 565 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 OGDHQ02218 1023 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 GFPT1Q06210 699 aaPredicted RBP10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 CDH18Q13634 790 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 FBXO43Q4G163 708 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 BRMS1LQ5PSV4 323 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 HEATR6Q6AI08 1181 aaKnown RBP10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 PPP1R2P3Q6NXS1 205 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 DCUN1D2Q6PH85 259 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 WDR59Q6PJI9 974 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 MFN1Q8IWA4 741 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 SYNPOQ8N3V7 929 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 SPEM1Q8N4L4 309 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 ZNF513Q8N8E2 541 aaPredicted RBP10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 USP33Q8TEY7 942 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 NT5C3BQ969T7 300 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 ACDQ96AP0 544 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 TMA16Q96EY4 203 aaKnown RBP10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 RPRD1AQ96P16 312 aaPredicted RBP10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 PRRX2Q99811 253 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 IER2Q9BTL4 223 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 TRIM7Q9C029 511 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 SIK2Q9H0K1 926 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 WDCPQ9H6R7 721 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 ABCB8Q9NUT2 735 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 ARHGEF38Q9NXL2 777 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 SLC12A6Q9UHW9 1150 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 HS3ST4Q9Y661 456 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 BZW2Q9Y6E2 419 aaKnown RBP10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 TP53BP1Q12888 1972 aaPredicted RBP10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 ANKRD36A6QL64 1941 aa10.64□□□□□ -0.71
TSPAN9-202ENST00000407263 THADAQ6YHU6 1953 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 SIGLEC16A6NMB1 481 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 AKR1B15C9JRZ8 316 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 LUC7L3O95232 432 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 CISD3P0C7P0 127 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 SP9P0CG40 484 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 CHRM1P11229 460 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 GZMAP12544 262 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 PSMA2P25787 234 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 HLA-FP30511 346 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 CD70P32970 193 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 DEKP35659 375 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 KIR2DL1P43626 348 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 PXNP49023 591 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 NUBP1P53384 320 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 HDAC4P56524 1084 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 DMWDQ09019 674 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 ZNF252P-AS1Q0IIN9 211 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 LMAN2Q12907 356 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 TBX2Q13207 712 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 AUHQ13825 339 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 DMC1Q14565 340 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 ARCQ7LC44 396 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 BNIPLQ7Z465 357 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 C14orf80Q86SX3 495 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 CNGA4Q8IV77 575 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 CCDC185Q8N715 623 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 IL17RCQ8NAC3 791 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 TXNDC5Q8NBS9 432 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 OR8K1Q8NGG5 319 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 SORCS1Q8WY21 1168 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 ATOH1Q92858 354 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 IGSF8Q969P0 613 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 AZIN2Q96A70 460 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 TRIM11Q96F44 468 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 PGAP3Q96FM1 320 aaPredicted RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 ACOX2Q99424 681 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 PRMT1Q99873 361 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 CIPCQ9C0C6 399 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 THAP2Q9H0W7 228 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 SPTLC3Q9NUV7 552 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 PARVAQ9NVD7 372 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 ZNHIT6Q9NWK9 470 aaKnown RBP10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 GGA2Q9UJY4 613 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 SLC8A2Q9UPR5 921 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 PAXBP1Q9Y5B6 917 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 RAD54BQ9Y620 910 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 R4GN57 208 aa10.63□□□□□ -0.71
TSPAN9-202ENST00000407263 NUP205Q92621 2012 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 H0Y626 953 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 SGK1O00141 431 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 AKR1B10O60218 316 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 F9P00740 461 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 PABPC1P11940 636 aaKnown RBP10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 HNRNPLP14866 589 aaKnown RBP eCLIP10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 HNRNPH3P31942 346 aaKnown RBP10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 CXCL12P48061 93 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 ZNF143P52747 638 aaPredicted RBP10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 NHLH1Q02575 133 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 MAMLD1Q13495 774 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 FUT11Q495W5 492 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 PREPLQ4J6C6 727 aaPredicted RBP10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 RABGAP1LQ5R372 815 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 CCDC122Q5T0U0 273 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 DAB2IPQ5VWQ8 1189 aa10.62□□□□□ -0.71
TSPAN9-202ENST00000407263 PLEKHA7Q6IQ23 1121 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms