RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 KRT36O76013 467 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 TSHRP16473 764 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 ERCC2P18074 760 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 AVPR1AP37288 418 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 SLC12A2P55011 1212 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 UBAP2LQ14157 1087 aaKnown RBP12.22□□□□□ -0.45
PCNX4-204ENST00000406949 DPYSL2Q16555 572 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 NCBP2-AS2Q69YL0 99 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 SLC9A4Q6AI14 798 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 C4orf22Q6V702 233 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 IPMKQ8NFU5 416 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 TMEM40Q8WWA1 233 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 HSFY1Q96LI6 401 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 QKIQ96PU8 341 aaKnown RBP eCLIP12.22□□□□□ -0.454e-7■□□□□ 9.1
PCNX4-204ENST00000406949 EPAS1Q99814 870 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 LAMA3Q16787 3333 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 GNAT1P11488 350 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 NOS2P35228 1153 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 PTPN9P43378 593 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 MRPS5P82675 430 aaKnown RBP12.22□□□□□ -0.45
PCNX4-204ENST00000406949 SOX4Q06945 474 aaPredicted RBP12.22□□□□□ -0.45
PCNX4-204ENST00000406949 SLC25A52Q3SY17 297 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 MARCH8Q5T0T0 291 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 METTL23Q86XA0 190 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 CCNYL1Q8N7R7 359 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 WNT8BQ93098 351 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 AZIN2Q96A70 460 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 SSU72Q9NP77 194 aaKnown RBP12.22□□□□□ -0.45
PCNX4-204ENST00000406949 SAR1AQ9NR31 198 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 VANGL2Q9ULK5 521 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.22□□□□□ -0.45
PCNX4-204ENST00000406949 PSME4Q14997 1843 aa12.22□□□□□ -0.45
PCNX4-204ENST00000406949 TXNDC9O14530 226 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 OPHN1O60890 802 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 VAV1P15498 845 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 SLC18A1P54219 525 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 CRYMQ14894 314 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 CLPTM1LQ96KA5 538 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 TSPYL2Q9H2G4 693 aaPredicted RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 DONSONQ9NYP3 566 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 FETUBQ9UGM5 382 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 CITO14578 2027 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 DPYSL4O14531 572 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 TNPO2O14787 897 aaKnown RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 HNRNPCL1O60812 293 aaKnown RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 GLRA3O75311 464 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 BEST1O76090 585 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 UPP2O95045 317 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 GCKP35557 465 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 SCNN1GP51170 649 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 ARPP19P56211 112 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 RNF135Q8IUD6 432 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 ANKLE1Q8NAG6 615 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 DNAJC9Q8WXX5 260 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 UTP4Q969X6 686 aaKnown RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 SPDL1Q96EA4 605 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 NAF1Q96HR8 494 aaKnown RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 SIGLEC10Q96LC7 697 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 CADM1Q9BY67 442 aaKnown RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 DUSP16Q9BY84 665 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 CAB39LQ9H9S4 337 aa12.21□□□□□ -0.45
PCNX4-204ENST00000406949 IARS2Q9NSE4 1012 aaKnown RBP12.21□□□□□ -0.45
PCNX4-204ENST00000406949 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.21□□□□□ -0.46
PCNX4-204ENST00000406949 GOLGA8QA0A0J9YX86 632 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 GOLGA8OA6NCC3 632 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 GOLGA8NF8WBI6 632 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 NVLO15381 856 aaKnown RBP12.21□□□□□ -0.46
PCNX4-204ENST00000406949 CFLARO15519 480 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 GCATO75600 419 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 THP07101 528 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 SLC1A6P48664 564 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 NEK3P51956 506 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 PRKD1Q15139 912 aaPredicted RBP12.21□□□□□ -0.46
PCNX4-204ENST00000406949 PCSK7Q16549 785 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 PARP6Q2NL67 630 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 PACS1Q6VY07 963 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 RINLQ6ZS11 566 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 RGS9BPQ6ZS82 235 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 ASRGL1Q7L266 308 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 OSTM1Q86WC4 334 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 SLC7A6OSQ96CW6 309 aaPredicted RBP12.21□□□□□ -0.46
PCNX4-204ENST00000406949 SGF29Q96ES7 293 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 FAXDC2Q96IV6 333 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 ATXN3LQ9H3M9 355 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 TASP1Q9H6P5 420 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 DCLRE1BQ9H816 532 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 ZNF358Q9NW07 568 aa12.21□□□□□ -0.46
PCNX4-204ENST00000406949 TNS1Q9HBL0 1735 aaKnown RBP12.2□□□□□ -0.46
PCNX4-204ENST00000406949 YJEFN3A6XGL0 299 aa12.2□□□□□ -0.46
PCNX4-204ENST00000406949 E7ENQ6 273 aa12.2□□□□□ -0.46
PCNX4-204ENST00000406949 XPO1O14980 1071 aaKnown RBP12.2□□□□□ -0.46
PCNX4-204ENST00000406949 PMPCBO75439 489 aa12.2□□□□□ -0.46
PCNX4-204ENST00000406949 LMNAP02545 664 aaKnown RBP12.2□□□□□ -0.46
PCNX4-204ENST00000406949 ITGA2BP08514 1039 aa12.2□□□□□ -0.46
PCNX4-204ENST00000406949 PGAM1P18669 254 aa12.2□□□□□ -0.46
PCNX4-204ENST00000406949 BDNFP23560 247 aa12.2□□□□□ -0.46
PCNX4-204ENST00000406949 SPRP35270 261 aaPredicted RBP12.2□□□□□ -0.46
PCNX4-204ENST00000406949 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms