RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LRIG2O94898 1065 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 ALDH2P05091 517 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 MX2P20592 715 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 SERPINB6P35237 376 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 WASHC5Q12768 1159 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 KBTBD12Q3ZCT8 623 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 BRMS1LQ5PSV4 323 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 ZNF534Q76KX8 674 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 SCD5Q86SK9 330 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 ZNF567Q8N184 647 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 C4orf33Q8N1A6 199 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 APBB2Q92870 758 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 SIGLEC10Q96LC7 697 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 CEP41Q9BYV8 373 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 KIF9Q9HAQ2 790 aa25.39■■□□□ 1.65
DNMT3A-206ENST00000406659 TRIM66O15016 1216 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 INHBAP08476 426 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 GATMP50440 423 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 FAM43BQ6ZT52 329 aaPredicted RBP25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 PID1Q7Z2X4 250 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 SLC44A1Q8WWI5 657 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 C8orf48Q96LL4 319 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 EBNA1BP2Q99848 306 aaKnown RBP25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 SMOC2Q9H3U7 446 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 EIF2B3Q9NR50 452 aaKnown RBP25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 ARHGEF38Q9NXL2 777 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 TTLL3Q9Y4R7 772 aa25.38■■□□□ 1.65
DNMT3A-206ENST00000406659 KIAA0754O94854 1291 aa25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 MYCP01106 439 aaPredicted RBP25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 MLNP12872 115 aa25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 SLC18A1P54219 525 aa25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 IL9RQ01113 521 aa25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 NUP93Q8N1F7 819 aa25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 SIK2Q9H0K1 926 aa25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 SAGE1Q9NXZ1 904 aa25.37■■□□□ 1.65
DNMT3A-206ENST00000406659 IQANK1A0A1B0GTG1 560 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 A0A1W2PQH9 124 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 OR6C75A6NL08 312 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 TCP11X1B4DZS4 312 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PSMB4P28070 264 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 CCR1P32246 355 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 GRIA1P42261 906 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PPIDQ08752 370 aaKnown RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 EIF4EBP2Q13542 120 aaPredicted RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 DDR2Q16832 855 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 SDHAF4Q5VUM1 108 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 ZNF280DQ6N043 979 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 NPWQ8N729 165 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PDCD7Q8N8D1 485 aaKnown RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 CASP10Q92851 521 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 HAPLN3Q96S86 360 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PAIP2Q9BPZ3 127 aaKnown RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 FBXO44Q9H4M3 255 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 KLHL8Q9P2G9 620 aaPredicted RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 IGSF9Q9P2J2 1179 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 SFMBT1Q9UHJ3 866 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 SCML2Q9UQR0 700 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 KCNK1O00180 336 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 MTSS1O43312 755 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 HOXA2O43364 376 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PQBP1O60828 265 aaKnown RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 SRGAP2BP0DMP2 458 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 KRT4P19013 534 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 MAGEA11P43364 429 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PGFP49763 221 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 RWDD4Q6NW29 188 aaKnown RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PRPF39Q86UA1 669 aaKnown RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 MON1AQ86VX9 555 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 CABS1Q96KC9 395 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 MAGEB18Q96M61 343 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 PGLYRP2Q96PD5 576 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 DEFB118Q96PH6 123 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 GPR62Q9BZJ7 368 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 NMUR1Q9HB89 426 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 SSU72Q9NP77 194 aaKnown RBP25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 SAMD15Q9P1V8 674 aa25.36■■□□□ 1.65
DNMT3A-206ENST00000406659 APOEP02649 317 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 CA4P22748 312 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 PTPN3P26045 913 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 SLC11A1P49279 550 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 GALNT2Q10471 571 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 MRPL58Q14197 206 aaKnown RBP25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 LRRC8BQ6P9F7 803 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 UNC5AQ6ZN44 842 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 CTAGE3PQ8IX95 158 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 MPP5Q8N3R9 675 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 DENND1AQ8TEH3 1009 aa25.35■■□□□ 1.65
DNMT3A-206ENST00000406659 MT-ND3P03897 115 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 GPR15P49685 360 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 ARPP19P56211 112 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 IFT88Q13099 833 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 SPARCL1Q14515 664 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 SLC26A11Q86WA9 606 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 NPAS4Q8IUM7 802 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 ARHGAP18Q8N392 663 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 PPM1NQ8N819 430 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 CCDC197Q8NCU1 140 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 MZB1Q8WU39 189 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 HDAC11Q96DB2 347 aa25.34■■□□□ 1.65
DNMT3A-206ENST00000406659 PCDHA11Q9Y5I1 949 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms