RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 MYO1AQ9UBC5 1043 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 LCMT1Q9UIC8 334 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 INTUQ9ULD6 942 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 EPN1Q9Y6I3 576 aaPredicted RBP10.97□□□□□ -0.65
RPAIN-204ENST00000405578 MYO16Q9Y6X6 1858 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 WDFY3Q8IZQ1 3526 aa10.97□□□□□ -0.65
RPAIN-204ENST00000405578 FLNBO75369 2602 aaKnown RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 E2F8A0AVK6 867 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 C4orf47A7E2U8 309 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 EIF3CLB5ME19 914 aaKnown RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 TAF4O00268 1085 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 ARNTLO00327 626 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 MDM4O15151 490 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 NDUFA10O95299 355 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 ZIC2O95409 532 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 TRUB2O95900 331 aaKnown RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 APOEP02649 317 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 TMEM253P0C7T8 217 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 IRF1P10914 325 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 HOXA6P31267 233 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 MAGEA1P43355 309 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 IFNAR2P48551 515 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 PXNP49023 591 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 SLC11A2P49281 568 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 SULT1E1P49888 294 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 GALCP54803 685 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 TBX4P57082 545 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 MAMLD1Q13495 774 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 MTF1Q14872 753 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 PDGFRLQ15198 375 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 TRIP4Q15650 581 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 ZNF77Q15935 545 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 ARHGAP29Q52LW3 1261 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 SH3PXD2AQ5TCZ1 1133 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 SYPL2Q5VXT5 272 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 PLEKHA7Q6IQ23 1121 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 OTUB2Q96DC9 234 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 MSANTD3Q96H12 275 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 PIWIL1Q96J94 861 aaKnown RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 MCEEQ96PE7 176 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 EIF3CQ99613 913 aaKnown RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 NCAPGQ9BPX3 1015 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 DDX50Q9BQ39 737 aaKnown RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 KLF16Q9BXK1 252 aaPredicted RBP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 VPS45Q9NRW7 570 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.96□□□□□ -0.65
RPAIN-204ENST00000405578 UVRAGQ9P2Y5 699 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 TMEM59LQ9UK28 342 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 CCL26Q9Y258 94 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 TLR6Q9Y2C9 796 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 PCDHGA5Q9Y5G8 931 aa10.96□□□□□ -0.65
RPAIN-204ENST00000405578 SOWAHDA6NJG2 315 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 M0QYT0 321 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 CHADO15335 359 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 ARHGAP6O43182 974 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 CYP1A2P05177 515 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 FYNP06241 537 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 HMBSP08397 361 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 GPD1P21695 349 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 CCR1P32246 355 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 RDXP35241 583 aaKnown RBP10.95□□□□□ -0.66
RPAIN-204ENST00000405578 RFC1P35251 1148 aaPredicted RBP10.95□□□□□ -0.66
RPAIN-204ENST00000405578 FLT3P36888 993 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 ZNF143P52747 638 aaPredicted RBP10.95□□□□□ -0.66
RPAIN-204ENST00000405578 AMPD2Q01433 879 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 DEUP1Q05D60 604 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 FCHO2Q0JRZ9 810 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 USP4Q13107 963 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 NR1H3Q13133 447 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 NME3Q13232 169 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 ARL13BQ3SXY8 428 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 DGKKQ5KSL6 1271 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 KIAA1211LQ6NV74 962 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 C1orf228Q6PIY5 440 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 TXNDC11Q6PKC3 985 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 HTR3DQ70Z44 454 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 TAC4Q86UU9 113 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 LRRC8AQ8IWT6 810 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 RHOT2Q8IXI1 618 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 EMC1Q8N766 993 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 OSCP1Q8WVF1 389 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 RXFP2Q8WXD0 754 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 CNPY3Q9BT09 278 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 THAP2Q9H0W7 228 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 GKN1Q9NS71 199 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 DUS2Q9NX74 493 aaKnown RBP10.95□□□□□ -0.66
RPAIN-204ENST00000405578 CTTNBP2NLQ9P2B4 639 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 SFMBT1Q9UHJ3 866 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 ZNF638Q14966 1978 aaKnown RBP10.95□□□□□ -0.66
RPAIN-204ENST00000405578 IGSF10Q6WRI0 2623 aa10.95□□□□□ -0.66
RPAIN-204ENST00000405578 ABCA7Q8IZY2 2146 aa10.94□□□□□ -0.66
RPAIN-204ENST00000405578 SYNJ2BP-COX16A0A087WUM0 186 aa10.94□□□□□ -0.66
RPAIN-204ENST00000405578 C2CD4BA6NLJ0 364 aa10.94□□□□□ -0.66
RPAIN-204ENST00000405578 SPECC1L-ADORA2AF8WAN1 911 aa10.94□□□□□ -0.66
RPAIN-204ENST00000405578 MYO1FO00160 1098 aa10.94□□□□□ -0.66
RPAIN-204ENST00000405578 IRAK2O43187 625 aa10.94□□□□□ -0.66
RPAIN-204ENST00000405578 ATMINO43313 823 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms