RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TYK2P29597 1187 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 GP5P40197 560 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 MATKP42679 507 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 HARS2P49590 506 aaKnown RBP11.03□□□□□ -0.64
CLIP4-204ENST00000404424 CACNA2D1P54289 1103 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 SESN2P58004 480 aaPredicted RBP11.03□□□□□ -0.64
CLIP4-204ENST00000404424 PDK1Q15118 436 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 SLC25A52Q3SY17 297 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 SPANXN3Q5MJ09 141 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 ARMCX2Q7L311 632 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 UNC5BQ8IZJ1 945 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 JADE3Q92613 823 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 ISL2Q96A47 359 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
CLIP4-204ENST00000404424 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 P2RY11Q96G91 374 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 LGMNQ99538 433 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 ECSITQ9BQ95 431 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 LBHD1Q9BQE6 289 aaPredicted RBP11.03□□□□□ -0.64
CLIP4-204ENST00000404424 IGSF9Q9P2J2 1179 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 ADAM28Q9UKQ2 775 aa11.03□□□□□ -0.64
CLIP4-204ENST00000404424 PPEF2O14830 753 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 RALBP11234 206 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 PRDX6P30041 224 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 ABCE1P61221 599 aaKnown RBP11.02□□□□□ -0.64
CLIP4-204ENST00000404424 DEUP1Q05D60 604 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 BTKQ06187 659 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 SLC27A1Q6PCB7 646 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 IZUMO2Q6UXV1 221 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 C10orf107Q8IVU9 208 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 ZMAT2Q96NC0 199 aaKnown RBP11.02□□□□□ -0.64
CLIP4-204ENST00000404424 SORT1Q99523 831 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 TTC1Q99614 292 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 MAGEB5Q9BZ81 275 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 FAM192AQ9GZU8 254 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 VCX3BQ9H321 246 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 ELP3Q9H9T3 547 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 S100A14Q9HCY8 104 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 SNTG2Q9NY99 539 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 KCNH4Q9UQ05 1017 aa11.02□□□□□ -0.64
CLIP4-204ENST00000404424 SCN1AP35498 2009 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 TRIP11Q15643 1979 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 ARHGAP42A6NI28 874 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 ENO4A6NNW6 628 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 RNF103O00237 685 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 MFSD11O43934 449 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 PRKCGP05129 697 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.65
CLIP4-204ENST00000404424 CCDC130P13994 396 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 ADORA2BP29275 332 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 MAGEA12P43365 314 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 IDH3AP50213 366 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 SLC25A3Q00325 362 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 FRG1Q14331 258 aaKnown RBP11.02□□□□□ -0.65
CLIP4-204ENST00000404424 C9orf57Q5W0N0 161 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 PGM2L1Q6PCE3 622 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 RASSF3Q86WH2 238 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 PYROXD2Q8N2H3 581 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 CCDC33Q8N5R6 958 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 SHCBP1Q8NEM2 672 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 OR6Y1Q8NGX8 325 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 ACTRT2Q8TDY3 377 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 PPP2R3CQ969Q6 453 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 CERS2Q96G23 380 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 C16orf70Q9BSU1 422 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 PPP1R12CQ9BZL4 782 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 DPEP3Q9H4B8 488 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 PPP1R1BQ9UD71 204 aaPredicted RBP11.02□□□□□ -0.65
CLIP4-204ENST00000404424 MCM3APO60318 1980 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 PAPPA2Q9BXP8 1791 aa11.02□□□□□ -0.65
CLIP4-204ENST00000404424 UPP2O95045 317 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 BAG2O95816 211 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 SPRP35270 261 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 GNL1P36915 607 aaPredicted RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 SULT1E1P49888 294 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 CRADDP78560 199 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 XIAPP98170 497 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 CDC42EP1Q00587 391 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 HNRNPDQ14103 355 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 FSCBQ5H9T9 825 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PDPK2PQ6A1A2 396 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 TAPT1Q6NXT6 567 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 SLC30A9Q6PML9 568 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 FAM131BQ86XD5 332 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 GSTCDQ8NEC7 633 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 RNF139Q8WU17 664 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 SREK1Q8WXA9 508 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PGBD4Q96DM1 585 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 LRRC40Q9H9A6 602 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 VTA1Q9NP79 307 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 SYBUQ9NX95 663 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 ZDHHC7Q9NXF8 308 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 TMEM216Q9P0N5 145 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 TUBGCP4Q9UGJ1 667 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 UBQLN1Q9UMX0 589 aaKnown RBP11.01□□□□□ -0.65
CLIP4-204ENST00000404424 PSAT1Q9Y617 370 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 CDY2AQ9Y6F7 541 aa11.01□□□□□ -0.65
CLIP4-204ENST00000404424 CDY1Q9Y6F8 540 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms