RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ADGRE3Q9BY15 652 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 PAIP1Q9H074 479 aaKnown RBP4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 MROH8Q9H579 483 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 STN1Q9H668 368 aaKnown RBP4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 CPNE5Q9HCH3 593 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 ASNSD1Q9NWL6 643 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 MTMR4Q9NYA4 1195 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 AFG3L2Q9Y4W6 797 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 HEMK1Q9Y5R4 338 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 HS3ST3A1Q9Y663 406 aa4.33□□□□□ -1.72
HMGB1P17-201ENST00000403495 NPIPB13A6NJU9 1138 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 NPIPB5A8MRT5 1133 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 NPIPB4C9JG80 1138 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 GCATO75600 419 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 ADRB1P08588 477 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 IFIT1P09914 478 aaKnown RBP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 NHLRC4P0CG21 123 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC8A1P32418 973 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 ELF1P32519 619 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 PCP4P48539 62 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 PTH2RP49190 550 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 CFHR3Q02985 330 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 TLE3Q04726 772 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 PUM1Q14671 1186 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 KCNB1Q14721 858 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 KPNB1Q14974 876 aaKnown RBP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 MAPRE1Q15691 268 aaKnown RBP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 CNGA3Q16281 694 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 FAM153CQ494X1 144 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 CBWD5Q5RIA9 395 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 GPATCH4Q5T3I0 446 aaKnown RBP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 DENND2CQ68D51 928 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC22A25Q6T423 547 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 SERPINA13PQ6UXR4 307 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 DCDC5Q6ZRR9 648 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC29A4Q7RTT9 530 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 TBC1D1Q86TI0 1168 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 Q8N1X5 172 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 PTGR2Q8N8N7 351 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 PCYOX1LQ8NBM8 494 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 GPR150Q8NGU9 434 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 KCNG4Q8TDN1 519 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 RNFT2Q96EX2 444 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZHX3Q9H4I2 956 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 RXFP3Q9NSD7 469 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 PI4KBQ9UBF8 816 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC13A4Q9UKG4 626 aa4.32□□□□□ -1.72
HMGB1P17-201ENST00000403495 TCRBV5S1A1TA0A578 114 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 CCDC151A5D8V7 595 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 SEPT4O43236 478 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 ANP32CO43423 234 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 DHX16O60231 1041 aaKnown RBP4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 MT-CO3P00414 261 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC3A2P08195 630 aaKnown RBP4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 ALDOCP09972 364 aaKnown RBP4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 WEE2P0C1S8 567 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 MATN1P21941 496 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 PRPH2P23942 346 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 ABCD3P28288 659 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 DUSP1P28562 367 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 PGM1P36871 562 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 PNPLA4P41247 253 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 RARRES1P49788 294 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 NFIL3Q16649 462 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 RUNDC3AQ59EK9 446 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 ARL13AQ5H913 290 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 WDR45BQ5MNZ6 344 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 AKNAD1Q5T1N1 836 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 SLC39A5Q6ZMH5 540 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 TRIM72Q6ZMU5 477 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 C1orf122Q6ZSJ8 110 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 LAS2Q8IYD9 372 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 ADGRF3Q8IZF5 1079 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 TBC1D22AQ8WUA7 517 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 UCMAQ8WVF2 138 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 REPS1Q96D71 796 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 DAZAP1Q96EP5 407 aaKnown RBP4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 RNF125Q96EQ8 232 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 MPHOSPH8Q99549 860 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 KLK15Q9H2R5 256 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 THAP1Q9NVV9 213 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 IRAK4Q9NWZ3 460 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 KLQ9UEF7 1012 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 SERGEFQ9UGK8 458 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 CNPY2Q9Y2B0 182 aa4.31□□□□□ -1.72
HMGB1P17-201ENST00000403495 CYP3A7-CYP3A51PA0A087WV96 503 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 PRSS47A8MTI9 375 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 B4E171 279 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 B8ZZF3 427 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 SYN3O14994 580 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 SPTLC2O15270 562 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 HNRNPRO43390 633 aaKnown RBP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 ORC4O43929 436 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 ARSAP15289 507 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 SFPQP23246 707 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 CYP3A7P24462 503 aa4.3□□□□□ -1.72
HMGB1P17-201ENST00000403495 PRKCHP24723 683 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms