RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 VPS45Q9NRW7 570 aa17.42■□□□□ 0.38
CSNK1D-205ENST00000403276 ASNSD1Q9NWL6 643 aa17.42■□□□□ 0.38
CSNK1D-205ENST00000403276 DDIT4Q9NX09 232 aa17.42■□□□□ 0.38
CSNK1D-205ENST00000403276 LIMA1Q9UHB6 759 aaKnown RBP17.42■□□□□ 0.38
CSNK1D-205ENST00000403276 MUC22E2RYF6 1773 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-205ENST00000403276 LAMA1P25391 3075 aa17.42■□□□□ 0.38
CSNK1D-205ENST00000403276 IGHV1OR15-9A0A0B4J2B8 117 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 DCDC2BA2VCK2 349 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 NPC1O15118 1278 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 HSF2BPO75031 334 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 GFPT2O94808 682 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 EPHX1P07099 455 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 MMEP08473 750 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 CDK11BP21127 795 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 TACR2P21452 398 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 RNASE9P60153 205 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 STARD3Q14849 445 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 C2CD6Q53TS8 623 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 FKBP15Q5T1M5 1219 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 MPP7Q5T2T1 576 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 MBLAC2Q68D91 279 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 RNF43Q68DV7 783 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 SERPINA13PQ6UXR4 307 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 CYP2U1Q7Z449 544 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 KIAA0907Q7Z7F0 614 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 MFN1Q8IWA4 741 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 CARNMT1Q8N4J0 409 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.41■□□□□ 0.384e-6■■□□□ 12.4
CSNK1D-205ENST00000403276 ATP6V0D2Q8N8Y2 350 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 TMEM35BQ8NCS4 154 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 NETO1Q8TDF5 533 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 WFIKKN2Q8TEU8 576 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 PIGKQ92643 395 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 RNF34Q969K3 372 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 LMLNQ96KR4 655 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 MKRN2Q9H000 416 aaKnown RBP17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 HSD3B7Q9H2F3 369 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.41■□□□□ 0.382e-8■■□□□ 13.7
CSNK1D-205ENST00000403276 SIK3Q9Y2K2 1263 aa17.41■□□□□ 0.38
CSNK1D-205ENST00000403276 PATE3B3GLJ2 98 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 SYNCRIPO60506 623 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 SDHBP21912 280 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 CDH5P33151 784 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 SNX16P57768 344 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 RPL6Q02878 288 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 LMAN2Q12907 356 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 NME3Q13232 169 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 NUMA1Q14980 2115 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 SYCP1Q15431 976 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 PTPRNQ16849 979 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 ANO6Q4KMQ2 910 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 FNDC3BQ53EP0 1204 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 FSCBQ5H9T9 825 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 MMS22LQ6ZRQ5 1243 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 ERMP1Q7Z2K6 904 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 CHSY1Q86X52 802 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 ERICH1Q86X53 443 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 CACUL1Q86Y37 369 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 AHI1Q8N157 1196 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 AOPEPQ8N6M6 819 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 FIBINQ8TAL6 211 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 SLC20A1Q8WUM9 679 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 CPA5Q8WXQ8 436 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 BTN2A3PQ96KV6 586 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 PCMTD1Q96MG8 357 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 IRX2Q9BZI1 471 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 PRDM16Q9HAZ2 1276 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 PLA2G4CQ9UP65 541 aa17.4■□□□□ 0.38
CSNK1D-205ENST00000403276 TYW5A2RUC4 315 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 KCNU1A8MYU2 1149 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 DAB1O75553 588 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 ZNF18P17022 549 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 POLR2EP19388 210 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 TFE3P19532 575 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 GABRB2P47870 512 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 JAM2P57087 298 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 UBXN1Q04323 297 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 SLC26A9Q7LBE3 791 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 TMPRSS6Q8IU80 811 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 ANKRD20A12PQ8NF67 263 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 ZNF397Q8NF99 534 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 EPS8L1Q8TE68 723 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 C18orf8Q96DM3 657 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 RTKNQ9BST9 563 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 ADAM33Q9BZ11 813 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 TMEM74BQ9NUR3 256 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 SLC12A6Q9UHW9 1150 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 INTS6Q9UL03 887 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 SPTBN2O15020 2390 aa17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-205ENST00000403276 LGALS16A8MUM7 142 aa17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 GOLGA8SH3BPF8 625 aa17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 M0QYT0 321 aa17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 SLC30A4O14863 429 aa17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 FOXD2O60548 495 aaPredicted RBP17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 ZNF217O75362 1048 aa17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 LUC7L3O95232 432 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 ATP1A3P13637 1013 aa17.38■□□□□ 0.37
CSNK1D-205ENST00000403276 CHRNB2P17787 502 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms