RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 ARHGAP8P85298 464 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 USP4Q13107 963 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ITGA9Q13797 1035 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ACAP1Q15027 740 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PRKD1Q15139 912 aaPredicted RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 PCSK7Q16549 785 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 TAZQ16635 292 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 FAM187BQ17R55 369 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SLC9A4Q6AI14 798 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 NXNQ6DKJ4 435 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 CXCL17Q6UXB2 119 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ZNF534Q76KX8 674 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 TMEM110Q86TL2 294 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 RNF135Q8IUD6 432 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 C10orf107Q8IVU9 208 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ZNF567Q8N184 647 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 TEX9Q8N6V9 391 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 CDKL2Q92772 493 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 FAM136AQ96C01 138 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 MARK4Q96L34 752 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 FERMT1Q9BQL6 677 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 OSBPL1AQ9BXW6 950 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 FRMD8P1Q9BZ68 369 aaPredicted RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 ADAMTS10Q9H324 1103 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ABHD16BQ9H3Z7 469 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PLEKHA5Q9HAU0 1116 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PLAC1Q9HBJ0 212 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 XAB2Q9HCS7 855 aaKnown RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 FLRT1Q9NZU1 646 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 KIAA1257Q9ULG3 409 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PLLPQ9Y342 182 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PPME1Q9Y570 386 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 WASF2Q9Y6W5 498 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SIP14410 1827 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 A0A0A0MRY4 1105 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 BCLAF3A2AJT9 711 aaKnown RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 E9PBE3 544 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 F8W810 466 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PHGDHO43175 533 aaKnown RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 KLHL41O60662 606 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 CCDC22O60826 627 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 GPR32O75388 356 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SORBS2O94875 1100 aaKnown RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 MYCP01106 439 aaPredicted RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 SLC4A1P02730 911 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 FAM200BP0CF97 657 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 BDNFP23560 247 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 MATKP42679 507 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PTDSS1P48651 473 aaKnown RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 PSEN2P49810 448 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 CLCNKBP51801 687 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ARPP19P56211 112 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SLC25A3Q00325 362 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 IRF9Q00978 393 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ZNF460Q14592 562 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 CRYMQ14894 314 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 STILQ15468 1287 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SV2CQ496J9 727 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 GNASQ5JWF2 1037 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 FAM219BQ5XKK7 198 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ATG16L1Q676U5 607 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SLC26A9Q7LBE3 791 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 STRA8Q7Z7C7 330 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SCN4BQ8IWT1 228 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 PPP4R1Q8TF05 950 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 MFSD3Q96ES6 412 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 TNIP3Q96KP6 325 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SENP8Q96LD8 212 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SPATA13Q96N96 652 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 QKIQ96PU8 341 aaKnown RBP eCLIP4.48□□□□□ -1.695e-7■■■■□ 22.3
SMC6-203ENST00000402989 BTBD10Q9BSF8 475 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 SYT17Q9BSW7 474 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 YIPF3Q9GZM5 350 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 RNPEPL1Q9HAU8 725 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 KCNK13Q9HB14 408 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 ANLNQ9NQW6 1124 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 IARS2Q9NSE4 1012 aaKnown RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 C20orf96Q9NUD7 363 aaPredicted RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 SLC39A10Q9ULF5 831 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 FNDC3AQ9Y2H6 1198 aaKnown RBP4.48□□□□□ -1.69
SMC6-203ENST00000402989 BPTFQ12830 3046 aa4.48□□□□□ -1.69
SMC6-203ENST00000402989 HMX2A2RU54 273 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 SDR42E2A6NKP2 422 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 MDM4O15151 490 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 ZBTB24O43167 697 aaPredicted RBP4.47□□□□□ -1.69
SMC6-203ENST00000402989 MSI1O43347 362 aaKnown RBP4.47□□□□□ -1.69
SMC6-203ENST00000402989 PMPCBO75439 489 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 B3GAT3O94766 335 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 ENDOD1O94919 500 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 DLDP09622 509 aaKnown RBP4.47□□□□□ -1.69
SMC6-203ENST00000402989 OR4Q2P0C623 313 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 NPR3P17342 541 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 NFKB1P19838 968 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 MSX2P35548 267 aaPredicted RBP4.47□□□□□ -1.69
SMC6-203ENST00000402989 ETV4P43268 484 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 ITKQ08881 620 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 POU6F1Q14863 301 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 TAF1CQ15572 869 aaPredicted RBP4.47□□□□□ -1.69
SMC6-203ENST00000402989 DPYSL2Q16555 572 aa4.47□□□□□ -1.69
SMC6-203ENST00000402989 EFHC1Q5JVL4 640 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms