RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 NPWQ8N729 165 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 MZB1Q8WU39 189 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 DCAKDQ8WVC6 231 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 DPF3Q92784 378 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 CHMP6Q96FZ7 201 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 CYTH2Q99418 400 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 FERMT1Q9BQL6 677 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 IGSF9Q9P2J2 1179 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 GGA2Q9UJY4 613 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 DOCK4Q8N1I0 1966 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 TCRBV9S1A1TA0A576 114 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 PRPF4O43172 522 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 GALTP07902 379 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 MNX1P50219 401 aaPredicted RBP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 GALNT2Q10471 571 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 EFTUD2Q15029 972 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 PARP6Q2NL67 630 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 ZNF280DQ6N043 979 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 MON1AQ86VX9 555 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 SCN4BQ8IWT1 228 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 ZNF567Q8N184 647 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 CASP10Q92851 521 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 HDAC11Q96DB2 347 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 PAFAH2Q99487 392 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 MRPL9Q9BYD2 267 aaKnown RBP12.63□□□□□ -0.39
CLIP4-203ENST00000401617 FBXO44Q9H4M3 255 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 RSPH14Q9UHP6 348 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 SNX10Q9Y5X0 201 aa12.63□□□□□ -0.39
CLIP4-203ENST00000401617 A0A1W2PQH9 124 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 KCNU1A8MYU2 1149 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 EBAG9O00559 213 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 EFEMP2O95967 443 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 NRG1Q02297 640 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 ELAVL2Q12926 359 aaKnown RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 MTM1Q13496 603 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 FUT10Q6P4F1 479 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 NETO2Q8NC67 525 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 ZNF784Q8NCA9 323 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 SLC44A1Q8WWI5 657 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 PRMT1Q99873 361 aaKnown RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 SSU72Q9NP77 194 aaKnown RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 OSER1Q9NX31 292 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 MTSS1O43312 755 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 PQBP1O60828 265 aaKnown RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 VNN2O95498 520 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 CCL5P13501 91 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 MX2P20592 715 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 PRKCHP24723 683 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 SERPINB6P35237 376 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 GPR15P49685 360 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 ZNF33AQ06730 810 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 SMARCB1Q12824 385 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 GPR17Q13304 367 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 QPCTQ16769 361 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 DDR2Q16832 855 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 SLC39A5Q6ZMH5 540 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 CYS1Q717R9 158 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 SPATS2Q86XZ4 545 aaKnown RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 CCNYQ8ND76 341 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 ZSCAN18Q8TBC5 510 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 CKAP2Q8WWK9 683 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 SCLYQ96I15 445 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 TOX2Q96NM4 488 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 EBNA1BP2Q99848 306 aaKnown RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 OXCT2Q9BYC2 517 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-203ENST00000401617 TRABDQ9H4I3 376 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 KCNK9Q9NPC2 374 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 HCSTQ9UBK5 93 aa12.62□□□□□ -0.39
CLIP4-203ENST00000401617 PTPN3P26045 913 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 EPHB2P29323 1055 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 CCR1P32246 355 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 STX2P32856 288 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 GARSP41250 739 aaKnown RBP12.61□□□□□ -0.39
CLIP4-203ENST00000401617 GRIA1P42261 906 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 MSH2P43246 934 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 SARNPP82979 210 aaKnown RBP12.61□□□□□ -0.39
CLIP4-203ENST00000401617 FAAP100Q0VG06 881 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 LRRC8BQ6P9F7 803 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 RSPO2Q6UXX9 243 aaPredicted RBP12.61□□□□□ -0.39
CLIP4-203ENST00000401617 ARHGAP18Q8N392 663 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 ATAD1Q8NBU5 361 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 RNF34Q969K3 372 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 HIPK3Q9H422 1215 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 ZC3H7BQ9UGR2 993 aaKnown RBP12.61□□□□□ -0.39
CLIP4-203ENST00000401617 SFMBT1Q9UHJ3 866 aa12.61□□□□□ -0.39
CLIP4-203ENST00000401617 SMG5Q9UPR3 1016 aaKnown RBP12.61□□□□□ -0.39
CLIP4-203ENST00000401617 FAM47DPA6NHR8 397 aa12.6□□□□□ -0.39
CLIP4-203ENST00000401617 TYROBPO43914 113 aa12.6□□□□□ -0.39
CLIP4-203ENST00000401617 PAGE1O75459 146 aa12.6□□□□□ -0.39
CLIP4-203ENST00000401617 FAM155BO75949 473 aa12.6□□□□□ -0.39
CLIP4-203ENST00000401617 USP46P62068 366 aa12.6□□□□□ -0.39
CLIP4-203ENST00000401617 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms