RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SRGAP2BP0DMP2 458 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 TRIP4Q15650 581 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-205ENST00000401607 C10orf120Q5SQS8 335 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 TMEM240Q5SV17 173 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 P2RY11Q96G91 374 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 CCSER2Q9H7U1 834 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 MARCH2Q9P0N8 246 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 YIPF1Q9Y548 306 aa26.41■■□□□ 1.82
CPNE1-205ENST00000401607 GOLGA6CA6NDK9 693 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 GOLGA6DP0CG33 693 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 SLC2A3P11169 496 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 HMGA1P17096 107 aaKnown RBP26.4■■□□□ 1.82
CPNE1-205ENST00000401607 HTR7P34969 479 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 NRG1Q02297 640 aaPredicted RBP26.4■■□□□ 1.82
CPNE1-205ENST00000401607 AP1B1Q10567 949 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 FASTKD3Q14CZ7 662 aaKnown RBP26.4■■□□□ 1.82
CPNE1-205ENST00000401607 HIF1AQ16665 826 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 KRT71Q3SY84 523 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 FAXCQ5TGI0 409 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 C4orf22Q6V702 233 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 FIBCD1Q8N539 461 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 PHACTR1Q9C0D0 580 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 KLC2Q9H0B6 622 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 GOLGA6AQ9NYA3 693 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 PCDHB12Q9Y5F1 795 aa26.4■■□□□ 1.82
CPNE1-205ENST00000401607 GOLGA6L10A6NI86 522 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 LILRB3O75022 631 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 FGF18O76093 207 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 METTL18O95568 372 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 MAGEA6P43360 314 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 FNBP1LQ5T0N5 605 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 PIK3R6Q5UE93 754 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 KCTD16Q68DU8 428 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 RWDD4Q6NW29 188 aaKnown RBP26.39■■□□□ 1.82
CPNE1-205ENST00000401607 CENPUQ71F23 418 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 MIB1Q86YT6 1006 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 CCNYQ8ND76 341 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 ATP6V1G3Q96LB4 118 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 ETNK1Q9HBU6 452 aa26.39■■□□□ 1.82
CPNE1-205ENST00000401607 MRPL17Q9NRX2 175 aaKnown RBP26.39■■□□□ 1.82
CPNE1-205ENST00000401607 A0A0A0MRY4 1105 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 ALOX15BO15296 676 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 TLR5O60602 858 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 IGLV3-27P01718 113 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 SERPINB6P35237 376 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 MLLT6P55198 1093 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-205ENST00000401607 GALNT2Q10471 571 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 MSS51Q4VC12 460 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 C14orf80Q86SX3 495 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 SH2D3CQ8N5H7 860 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 TBC1D31Q96DN5 1066 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 C1orf74Q96LT6 269 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 SPATA13Q96N96 652 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 TMEM109Q9BVC6 243 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 ZBP1Q9H171 429 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 E7ESA3 106 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 NCAM2O15394 837 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 BANF1O75531 89 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 ARL4CP56559 192 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 PPIDQ08752 370 aaKnown RBP26.38■■□□□ 1.81
CPNE1-205ENST00000401607 WASHC5Q12768 1159 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 PDIA2Q13087 525 aaKnown RBP26.38■■□□□ 1.81
CPNE1-205ENST00000401607 ANKRD20A2Q5SQ80 823 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 ANKRD20A1Q5TYW2 823 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 ANKRD20A3Q5VUR7 823 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 GPR65Q8IYL9 337 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 C7orf61Q8IZ16 206 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 OVCA2Q8WZ82 227 aa26.38■■□□□ 1.81
CPNE1-205ENST00000401607 SLC12A8A0AV02 714 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 E9PAM4 449 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 RNF103O00237 685 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 APOEP02649 317 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 CSH1P0DML2 217 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 CSH2P0DML3 217 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 HP1BP3Q5SSJ5 553 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-205ENST00000401607 SYCP2LQ5T4T6 812 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 SNX30Q5VWJ9 437 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 CCDC13Q8IYE1 715 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 PDZD8Q8NEN9 1154 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 CLP1Q92989 425 aaKnown RBP26.37■■□□□ 1.81
CPNE1-205ENST00000401607 HDAC11Q96DB2 347 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 WDR83Q9BRX9 315 aaKnown RBP26.37■■□□□ 1.81
CPNE1-205ENST00000401607 FNIP2Q9P278 1114 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 INSL6Q9Y581 213 aa26.37■■□□□ 1.81
CPNE1-205ENST00000401607 TEX28O15482 410 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 FGF10O15520 208 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-205ENST00000401607 PSRC1Q6PGN9 363 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-205ENST00000401607 ARHGEF18Q6ZSZ5 1173 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 ZBED8Q8IZ13 594 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 ZNF683Q8IZ20 524 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 ZNF276Q8N554 614 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 MYRFLQ96LU7 910 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 ZBED2Q9BTP6 218 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 CENPHQ9H3R5 247 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 RXFP1Q9HBX9 757 aa26.36■■□□□ 1.81
CPNE1-205ENST00000401607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.36■■□□□ 1.81
CPNE1-205ENST00000401607 HMGB1P1B2RPK0 211 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-205ENST00000401607 EIF3HO15372 352 aaKnown RBP eCLIP26.35■■□□□ 1.818e-7■■□□□ 13.6
CPNE1-205ENST00000401607 MX2P20592 715 aa26.35■■□□□ 1.81
CPNE1-205ENST00000401607 GARSP41250 739 aaKnown RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms