RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PAGR1Q9BTK6 254 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 APOL5Q9BWW9 433 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ABCB10Q9NRK6 738 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MAN1B1Q9UKM7 699 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 RAB26Q9ULW5 256 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 GNPATO15228 680 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 HCKP08631 526 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 FAM187BQ17R55 369 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 NLRP10Q86W26 655 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SLITRK4Q8IW52 837 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 LRRC4BQ9NT99 713 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ACAD8Q9UKU7 415 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MCIDASD6RGH6 385 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 GSTM2P28161 218 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ATP2C1P98194 919 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SYT16Q17RD7 645 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 KCNK18Q7Z418 384 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 DSG4Q86SJ6 1040 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ARHGEF26Q96DR7 871 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MSTO1Q9BUK6 570 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC39A2Q9NP94 309 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 GLS2Q9UI32 602 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 KIAA1257Q9ULG3 409 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PFKFB1P16118 471 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PDK1Q15118 436 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 CA9Q16790 459 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 LRIF1Q5T3J3 769 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC44A2Q8IWA5 706 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ACTRT2Q8TDY3 377 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 PLEKHA1Q9HB21 404 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 TM9SF3Q9HD45 589 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 CDH9Q9ULB4 789 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF644Q9H582 1327 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 CDH13P55290 713 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 CACNB1Q02641 598 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNHIT3Q15649 155 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 KYQ8NBH2 561 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 MCOLN3Q8TDD5 553 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC52A1Q9NWF4 448 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 SNX8Q9Y5X2 465 aa8.76□□□□□ -1.01
CACNA1C-220ENST00000399655 IGF2BP3O00425 579 aaKnown RBP eCLIP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 IFNA1P01562 189 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SNRPAP09012 282 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 CHRNB1P11230 501 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 FANCLQ9NW38 375 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 GRXCR2A6NFK2 248 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 RNMTO43148 476 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 HMGCRP04035 888 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 GPD2P43304 727 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 NFE2L1Q14494 772 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 USP10Q14694 798 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ANKFN1Q8N957 763 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF578Q96N58 590 aaPredicted RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 RNF112Q9ULX5 631 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ENTPD4Q9Y227 616 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 IFT52Q9Y366 437 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 MFSD11O43934 449 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 PIK3CGP48736 1102 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 GALNTL6Q49A17 601 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ZSWIM3Q96MP5 696 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 CCNKO75909 580 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 GADD45AP24522 165 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 AIMP2Q13155 320 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 EIF2B1Q14232 305 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 C4orf17Q53FE4 359 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 EFHC1Q5JVL4 640 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SNAP47Q5SQN1 464 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 NIP7Q9Y221 180 aaKnown RBP eCLIP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 DENND3A2RUS2 1198 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 CENPBD1B2RD01 187 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 LDLRP01130 860 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 PER3P56645 1201 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 NAA20P61599 178 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 POLD3Q15054 466 aaPredicted RBP8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ZNF792Q3KQV3 632 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SNX27Q96L92 541 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 LYVE1Q9Y5Y7 322 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 HHLA1C9JL84 531 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 NPIPA7E9PJI5 369 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 PIP5K1CO60331 668 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 FESP07332 822 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 NPIPA8P0DM63 369 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SLC9A3P48764 834 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ARSEP51690 589 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 BNIP2Q12982 314 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SNX32Q86XE0 403 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 TSPYL6Q8N831 410 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 QRFPRQ96P65 431 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 MED15Q96RN5 788 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 CAPN10Q9HC96 672 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 ABCD2Q9UBJ2 740 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 FBXO40Q9UH90 709 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 APRTP07741 180 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 SSX2Q16385 188 aa8.75□□□□□ -1.01
CACNA1C-220ENST00000399655 MAPK6Q16659 721 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms