RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 C1orf50Q9BV19 199 aa8.55□□□□□ -1.04
SPTLC3-201ENST00000399002 SLITRK2Q9H156 845 aa8.55□□□□□ -1.04
SPTLC3-201ENST00000399002 PCYOX1Q9UHG3 505 aa8.55□□□□□ -1.04
SPTLC3-201ENST00000399002 NFASCO94856 1347 aa8.55□□□□□ -1.04
SPTLC3-201ENST00000399002 AKAP3O75969 853 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MED26O95402 600 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 FYNP06241 537 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 GUCA1AP43080 201 aaPredicted RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 POLD2P49005 469 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ITPK1Q13572 414 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 PPP1R15BQ5SWA1 713 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MARC1Q5VT66 337 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 KIAA0895Q8NCT3 520 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 DUSP12Q9UNI6 340 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TNS2Q63HR2 1409 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 UBOX5O94941 541 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 KCNH1O95259 989 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 BCL10O95999 233 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 SERPINF2P08697 491 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CES1P23141 567 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MAPK8P45983 427 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 RAP1GAPP47736 663 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 PAGE2BQ5JRK9 111 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 FKBP1CQ5VVH2 108 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 LPCAT2Q7L5N7 544 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 SYT15Q9BQS2 421 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 SERHL2Q9H4I8 314 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 SERHLQ9NQF3 203 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 INTS13Q9NVM9 706 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CACNA2D2Q9NY47 1150 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 VPS51Q9UID3 782 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 PCDHGC5Q9Y5F6 944 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ROBO3Q96MS0 1386 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM131LA2VDJ0 1609 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MROH1Q8NDA8 1641 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CYP3A7-CYP3A51PA0A087WV96 503 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 A0A087WXM4 84 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ENO4A6NNW6 628 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CYP3A7P24462 503 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 RPL21P46778 160 aaKnown RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 NEK3P51956 506 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TBX4P57082 545 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CSHL1Q14406 222 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CNGA2Q16280 664 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 SLC45A4Q5BKX6 768 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 RETSATQ6NUM9 610 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 LRRC74BQ6ZQY2 392 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 C15orf52Q6ZUT6 534 aaKnown RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 SYTL5Q8TDW5 730 aaPredicted RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MTERF3Q96E29 417 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TRIM8Q9BZR9 551 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM124BQ9H5Z6 455 aaPredicted RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ATRNO75882 1429 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 QSOX1O00391 747 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ERVK-10P10266 1014 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CKBP12277 381 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ME2P23368 584 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CENPAP49450 140 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CASP4P49662 377 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CACNA2D1P54289 1103 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 BNIP2Q12982 314 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 INAQ16352 499 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 PPP4R4Q6NUP7 873 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CDC73Q6P1J9 531 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MTSS1LQ765P7 747 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 DEFB107AQ8IZN7 70 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 DPP10Q8N608 796 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 SOCS4Q8WXH5 440 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM169Q96HH4 297 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 IL22Q9GZX6 179 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MAN1C1Q9NR34 630 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 THG1LQ9NWX6 298 aaKnown RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 LOC102724159A0A0B4J2E5 919 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 E2F8A0AVK6 867 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 RBAK-RBAKDNI3L0D1 243 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CXCL11O14625 94 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 LIN7AO14910 233 aaPredicted RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ASNA1O43681 348 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ACO1P21399 889 aaKnown RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 VAC14Q08AM6 782 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TMEM62Q0P6H9 643 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CDC16Q13042 620 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 PWP2Q15269 919 aaKnown RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TXNDC11Q6PKC3 985 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 CRELD2Q6UXH1 353 aaPredicted RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 OR6Y1Q8NGX8 325 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 TAS1R2Q8TE23 839 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 C18orf25Q96B23 403 aaPredicted RBP8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 MIEF1Q9NQG6 463 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 ARHGAP28Q9P2N2 729 aa8.54□□□□□ -1.04
SPTLC3-201ENST00000399002 WDR27A2RRH5 827 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF862O60290 1169 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CPSF4O95639 269 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 GLI1P08151 1106 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PCSK2P16519 638 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 DGKAP23743 735 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 GSTA3Q16772 222 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 EPC2Q52LR7 807 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms