RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 DGCR6Q14129 220 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 SCYL2Q6P3W7 929 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 JPH3Q8WXH2 748 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ADIPOR1Q96A54 375 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ADGRE3Q9BY15 652 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 SEC14L4Q9UDX3 406 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ENOPH1Q9UHY7 261 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 G3V2T6 193 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 WDPCPO95876 746 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 RGS8P57771 180 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 GUK1Q16774 197 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ZNF792Q3KQV3 632 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 RNASEH2BQ5TBB1 312 aaKnown RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 OR52K1Q8NGK4 314 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 TOP1MTQ969P6 601 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ZNF560Q96MR9 790 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ALPK1Q96QP1 1244 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 BOLA2-SMG1P6H3BVE0 249 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 CHN1P15882 459 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 TSHRP16473 764 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 PVALBP20472 110 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 DGKQP52824 942 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 FAM20CQ8IXL6 584 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 C1orf52Q8N6N3 182 aaKnown RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 C3orf49Q96BT1 292 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 FARSAQ9Y285 508 aaKnown RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 FRMPD2Q68DX3 1309 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 AGTP01019 485 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 UMPSP11172 480 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 HNRNPFP52597 415 aaKnown RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 XRCC4Q13426 336 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 HERC3Q15034 1050 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 TMEM214Q6NUQ4 689 aaKnown RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 SARM1Q6SZW1 724 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 DNAJC10Q8IXB1 793 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 OR2L5Q8NG80 312 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 EXOC2Q96KP1 924 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 BHLHE41Q9C0J9 482 aaPredicted RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 CFAP97Q9P2B7 532 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 C3orf18Q9UK00 162 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 CDY2AQ9Y6F7 541 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 SCAF11Q99590 1463 aaKnown RBP13.08□□□□□ -0.32
CCBE1-201ENST00000398179 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.32
CCBE1-201ENST00000398179 FHP07954 510 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PPP2R2BQ00005 443 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 ADAM32Q8TC27 787 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 IFT43Q96FT9 208 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 FABP1P07148 127 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 ATP6V1B2P21281 511 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 DNAJB1P25685 340 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 CD83Q01151 205 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 ALCAMQ13740 583 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PSMD5Q16401 504 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PAPD4Q6PIY7 484 aaKnown RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 ZNF767PQ75MW2 155 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 ANKLE2Q86XL3 938 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 CLIC6Q96NY7 704 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 NEUROG2Q9H2A3 272 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 KCNH7Q9NS40 1196 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 THAP1Q9NVV9 213 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 RDH8Q9NYR8 311 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 GRIN2AQ12879 1464 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 RRN3P2A6NIE6 340 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 SEC24AO95486 1093 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PBLDP30039 288 aaPredicted RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 EFL1Q7Z2Z2 1120 aaKnown RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 POF1BQ8WVV4 589 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 HIPK3Q9H422 1215 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 TRMT13Q9NUP7 481 aaKnown RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 NEDD4P46934 1319 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 MDM4O15151 490 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 M6PRP20645 277 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PTPN9P43378 593 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 COL13A1Q5TAT6 717 aaPredicted RBP13.07□□□□□ -0.32
CCBE1-201ENST00000398179 TTC6Q86TZ1 520 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 GALNT11Q8NCW6 608 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PBKQ96KB5 322 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 ZBTB18Q99592 522 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 ASH2LQ9UBL3 628 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PCDHA7Q9UN72 937 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 RBP1P09455 135 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PSKH1P11801 424 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 NEDD8Q15843 81 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 NDUFAF5Q5TEU4 345 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 SYDE2Q5VT97 1194 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 RNF220Q5VTB9 566 aa13.07□□□□□ -0.32
CCBE1-201ENST00000398179 SSX7Q7RTT5 188 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms