RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 IGSF9Q9P2J2 1179 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 LIMD1Q9UGP4 676 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 NEU3Q9UQ49 428 aa20.12■□□□□ 0.81
MAP1LC3A-203ENST00000397709 IGLV3-10A0A075B6K4 115 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 E9PAM4 449 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 F5H5T6 163 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CD48P09326 243 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 KDELR1P24390 212 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 HTR7P34969 479 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZNF135P52742 658 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CDH6P55285 790 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RWDD2BP57060 319 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZP2Q05996 745 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DPYSL3Q14195 570 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 GRM2Q14416 872 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 KRT81Q14533 505 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PDK2Q15119 407 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PDGFRLQ15198 375 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RFWD3Q6PCD5 774 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 YAF2Q8IY57 180 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 LGI2Q8N0V4 545 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 EXD1Q8NHP7 514 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RSAD2Q8WXG1 361 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PRICKLE1Q96MT3 831 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 EPAS1Q99814 870 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 KCNK12Q9HB15 430 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 VANGL2Q9ULK5 521 aa20.11■□□□□ 0.81
MAP1LC3A-203ENST00000397709 C3orf70A6NLC5 250 aaPredicted RBP20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DRGXA6NNA5 263 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ENC1O14682 589 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CHADO15335 359 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 LRIG2O94898 1065 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 HOXC13P31276 330 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 VCPP55072 806 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ETF1P62495 437 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PPP6R3Q5H9R7 873 aaPredicted RBP20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZFYVE27Q5T4F4 411 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TRIM68Q6AZZ1 485 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 LRRC31Q6UY01 552 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 VSIG1Q86XK7 387 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ADGRG2Q8IZP9 1017 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 KCTD6Q8NC69 237 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 IGSF8Q969P0 613 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TBC1D31Q96DN5 1066 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZFYVE19Q96K21 471 aa20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TRMT61BQ9BVS5 477 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RCOR3Q9P2K3 495 aaPredicted RBP20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PPARGC1AQ9UBK2 798 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3A-203ENST00000397709 LRRD1A4D1F6 860 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 PI4K2BG5E9Z4 385 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 H3BRJ5 948 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 EEF2KO00418 725 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TRDMT1O14717 391 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FANCGO15287 622 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CREB3O43889 395 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TSPAN3O60637 253 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SRGAP2O75044 1071 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZRANB2O95218 330 aaKnown RBP eCLIP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ATP1A1P05023 1023 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 GOT1P17174 413 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 IL4RP24394 825 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 GDI1P31150 447 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 HCAR3P49019 387 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DNA2P51530 1060 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SGSHP51688 502 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TAZQ16635 292 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DCAF12L1Q5VU92 463 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 MAP7D3Q8IWC1 876 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RCOR2Q8IZ40 523 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 IRF7Q92985 503 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FAF2Q96CS3 445 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 P2RY11Q96G91 374 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RBM41Q96IZ5 413 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 C16orf45Q96MC5 204 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RPRD1AQ96P16 312 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZNF670Q9BS34 389 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 HPS4Q9NQG7 708 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 SPHK2Q9NRA0 654 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CWC15Q9P013 229 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 MARK1Q9P0L2 795 aa20.09■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DOCK4Q8N1I0 1966 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 COL4A3Q01955 1670 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 C19orf67A6NJJ6 358 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ZNF487B1APH4 448 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ARNTLO00327 626 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 NFATC1O95644 943 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 CYP17A1P05093 508 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 BMP1P13497 986 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ARSAP15289 507 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 ARL4AP40617 200 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 IRAK1P51617 712 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TPI1P60174 286 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 DPYSQ14117 519 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 MPPE1Q53F39 396 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RABGAP1LQ5R372 815 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 TTC39BQ5VTQ0 682 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 FYB2Q5VWT5 728 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RNF43Q68DV7 783 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 RHBDF2Q6PJF5 856 aa20.08■□□□□ 0.81
MAP1LC3A-203ENST00000397709 MFSD7Q6UXD7 560 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms