RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ANGPT1Q15389 498 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 CCDC122Q5T0U0 273 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 NUDT18Q6ZVK8 323 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 TC2NQ8N9U0 490 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 RPLP0P6Q8NHW5 317 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 CCDC26Q8TAB7 109 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 CHP1Q99653 195 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 NENFQ9UMX5 172 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 HS3ST4Q9Y661 456 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 SCINQ9Y6U3 715 aa21.93■■□□□ 1.1
TSPAN4-206ENST00000397408 A0A0A0MRY4 1105 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 TNFRSF4P43489 277 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 SLC18A3Q16572 532 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 C2orf27AQ580R0 203 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 CFAP52Q8N1V2 620 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 CNPY3Q9BT09 278 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 SLC2A11Q9BYW1 496 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 SIK2Q9H0K1 926 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 THAP2Q9H0W7 228 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 KCNH6Q9H252 994 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 TMPRSS4Q9NRS4 437 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 SLC27A6Q9Y2P4 619 aa21.92■■□□□ 1.1
TSPAN4-206ENST00000397408 AKR1B10O60218 316 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 CCR3P51677 355 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 HDAC4P56524 1084 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 OGDHQ02218 1023 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 AUHQ13825 339 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 ASTE1Q2TB18 679 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 RNF43Q68DV7 783 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 FBXL22Q6P050 247 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 MFN1Q8IWA4 741 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 USP33Q8TEY7 942 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 CENPIQ92674 756 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 PRMT8Q9NR22 394 aaPredicted RBP21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 C2orf42Q9NWW7 574 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 VANGL2Q9ULK5 521 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 SNX10Q9Y5X0 201 aa21.91■■□□□ 1.1
TSPAN4-206ENST00000397408 PRRT4C9JH25 899 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 ATG13O75143 517 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 DESP17661 470 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 KIR2DL1P43626 348 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 SATB1Q01826 763 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 TCF15Q12870 199 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 GEN1Q17RS7 908 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 RABGAP1LQ5R372 815 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 EMC10Q5UCC4 262 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 ANKS1BQ7Z6G8 1248 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 CIR1Q86X95 450 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 MAML2Q8IZL2 1156 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 WFDC5Q8TCV5 224 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 ACDQ96AP0 544 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 CCDC42Q96M95 316 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 RPRD1AQ96P16 312 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 TRIM7Q9C029 511 aa21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 NHEJ1Q9H9Q4 299 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 MRPL47Q9HD33 250 aaKnown RBP21.9■■□□□ 1.1
TSPAN4-206ENST00000397408 TMEM191CA6NGB0 347 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 CHURC1-FNTBB4DL54 471 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 CHRM1P11229 460 aaPredicted RBP21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 PSMA2P25787 234 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 HLA-FP30511 346 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 TIE1P35590 1138 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 CXCL12P48061 93 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 MRPS21P82921 87 aaKnown RBP21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 CDH18Q13634 790 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 MAMSTRQ6ZN01 415 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 C14orf80Q86SX3 495 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 CARNMT1Q8N4J0 409 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 IGSF8Q969P0 613 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 ZDHHC4Q9NPG8 344 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 ABCB8Q9NUT2 735 aa21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 MYO18AQ92614 2054 aaKnown RBP21.89■■□□□ 1.1
TSPAN4-206ENST00000397408 H0Y858 1186 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 LUC7L3O95232 432 aaKnown RBP21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 IRAK1P51617 712 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 GALCP54803 685 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 ARL13BQ3SXY8 428 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 TTC39BQ5VTQ0 682 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 CCDC117Q8IWD4 279 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 ZNF513Q8N8E2 541 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 ZNF557Q8N988 423 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 ARHGEF26Q96DR7 871 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 HAPLN3Q96S86 360 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 SPTLC3Q9NUV7 552 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 POLR3BQ9NW08 1133 aaPredicted RBP21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 GGA2Q9UJY4 613 aa21.89■■□□□ 1.09
TSPAN4-206ENST00000397408 KLF8O95600 359 aaPredicted RBP21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 PABPC1P11940 636 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 CDC25BP30305 580 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 ADRA1BP35368 520 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 PTPN5P54829 565 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 CSTF1Q05048 431 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 ZNF252P-AS1Q0IIN9 211 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 EGFLAMQ63HQ2 1017 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 SCYL2Q6P3W7 929 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 TSSK4Q6SA08 328 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 CCDC33Q8N5R6 958 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 ALLCQ8N6M5 410 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 CCDC185Q8N715 623 aa21.88■■□□□ 1.09
TSPAN4-206ENST00000397408 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms