RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 SCUBE3Q8IX30 993 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 AHI1Q8N157 1196 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.55□□□□□ -0.4
GAPDH-202ENST00000396856 PRCCQ92733 491 aaPredicted RBP12.55□□□□□ -0.4
GAPDH-202ENST00000396856 MED15Q96RN5 788 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 CRACR2AQ9BSW2 395 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 SLC4A5Q9BY07 1137 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 PRDM16Q9HAZ2 1276 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 TMEM74BQ9NUR3 256 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 DACH1Q9UI36 760 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 THADAQ6YHU6 1953 aa12.55□□□□□ -0.4
GAPDH-202ENST00000396856 CAPN9O14815 690 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 CALCAP01258 141 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 CFIP05156 583 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 ATP5BP06576 529 aaKnown RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 EPHX1P07099 455 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 SERPINF2P08697 491 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 PABPC1P11940 636 aaKnown RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 SLC9A1P19634 815 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 CD6P30203 668 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 OXTRP30559 389 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 SIM1P81133 766 aaPredicted RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 FAM133BQ5BKY9 247 aaKnown RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 PIK3R6Q5UE93 754 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 TMEM215Q68D42 235 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 DENND1BQ6P3S1 775 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 KIAA0907Q7Z7F0 614 aaPredicted RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 TMEM110Q86TL2 294 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 DQX1Q8TE96 717 aaKnown RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 ERLEC1Q96DZ1 483 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 SIPA1Q96FS4 1042 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 ZNF419Q96HQ0 510 aaPredicted RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 HSPA12BQ96MM6 686 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 MKRN2Q9H000 416 aaKnown RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 THAP9Q9H5L6 903 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 FBRSQ9HAH7 460 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 POPDC2Q9HBU9 364 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 ITM2CQ9NQX7 267 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 ABCB8Q9NUT2 735 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 USP36Q9P275 1121 aaKnown RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 SUSD2Q9UGT4 822 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 GGA2Q9UJY4 613 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 SLC6A14Q9UN76 642 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 NAV2Q8IVL1 2488 aa12.54□□□□□ -0.4
GAPDH-202ENST00000396856 ATXN2Q99700 1313 aaKnown RBP12.54□□□□□ -0.4
GAPDH-202ENST00000396856 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 ASXL3Q9C0F0 2248 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 E5RJQ4 531 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 H0Y626 953 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 TBL1XO60907 577 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 TRIM16O95361 564 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 APOEP02649 317 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 FYNP06241 537 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 ACADMP11310 421 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 ENGP17813 658 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 PRKCHP24723 683 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 PON1P27169 355 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 USP8P40818 1118 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 ATXN3P54252 364 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 SNX16P57768 344 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 YWHAZP63104 245 aaKnown RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 GFPT1Q06210 699 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 PDCLQ13371 301 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 MAN2A1Q16706 1144 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 ARHGAP44Q17R89 818 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 FNDC3BQ53EP0 1204 aaKnown RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 WDR45BQ5MNZ6 344 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 RFWD3Q6PCD5 774 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 TMPRSS6Q8IU80 811 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 IRF2BP1Q8IU81 584 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 SLC41A1Q8IVJ1 513 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 CCDC117Q8IWD4 279 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 DEFB119Q8N690 84 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 HJURPQ8NCD3 748 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 CADM4Q8NFZ8 388 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 SORCS1Q8WY21 1168 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 SHC3Q92529 594 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 SLC39A13Q96H72 371 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 FCRL2Q96LA5 508 aaPredicted RBP12.53□□□□□ -0.4
GAPDH-202ENST00000396856 NOX5Q96PH1 765 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 SLC6A17Q9H1V8 727 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 SLC32A1Q9H598 525 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 NAALADL1Q9UQQ1 740 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
GAPDH-202ENST00000396856 BECN2A8MW95 431 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 PAPSS1O43252 624 aaPredicted RBP12.52□□□□□ -0.41
GAPDH-202ENST00000396856 IGLV3-19P01714 112 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 GLI1P08151 1106 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 SYPP08247 313 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 DLDP09622 509 aaKnown RBP12.52□□□□□ -0.41
GAPDH-202ENST00000396856 GNSP15586 552 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
GAPDH-202ENST00000396856 ERCC5P28715 1186 aaPredicted RBP12.52□□□□□ -0.41
GAPDH-202ENST00000396856 SLC6A4P31645 630 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 TPMTP51580 245 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 SGSHP51688 502 aa12.52□□□□□ -0.41
GAPDH-202ENST00000396856 COPAP53621 1224 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms