RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SFSWAPQ12872 951 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 KCNJ12Q14500 433 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 RABEP1Q15276 862 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 PROX2Q3B8N5 592 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 ARHGAP40Q5TG30 622 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 ARHGAP18Q8N392 663 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 OR2T34Q8NGX1 318 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 MYO19Q96H55 970 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 NEUROG2Q9H2A3 272 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 CPNE5Q9HCH3 593 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 AASDHPPTQ9NRN7 309 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 SERGEFQ9UGK8 458 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 FAM47DPA6NHR8 397 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 LRRC72A6NJI9 287 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 PYCARD-AS1I3L0S3 204 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 TLR4O00206 839 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 DXOO77932 396 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 CLSTN1O94985 981 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 ASS1P00966 412 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 ATP5BP06576 529 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 LY6DQ14210 128 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 E2F4Q16254 413 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 ZACNQ401N2 412 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 SPOPLQ6IQ16 392 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 DHX40Q8IX18 779 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 PDILTQ8N807 584 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 TMA16Q96EY4 203 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 ARID3AQ99856 593 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 NT5C1AQ9BXI3 368 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 UBXN6Q9BZV1 441 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 TFIP11Q9UBB9 837 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 FZD4Q9ULV1 537 aa8.8□□□□□ -1
SCFD1-202ENST00000396629 TPX2Q9ULW0 747 aaKnown RBP8.8□□□□□ -1
SCFD1-202ENST00000396629 DOCK9Q9BZ29 2069 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 LATS1O95835 1130 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 POLR2EP19388 210 aaKnown RBP8.79□□□□□ -1
SCFD1-202ENST00000396629 YWHAGP61981 247 aaKnown RBP eCLIP8.79□□□□□ -1
SCFD1-202ENST00000396629 ASIC1P78348 528 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 AMPD3Q01432 767 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 ARID5BQ14865 1188 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 SLC45A4Q5BKX6 768 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 RAB41Q5JT25 222 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 PPP1R26Q5T8A7 1209 aaPredicted RBP8.79□□□□□ -1
SCFD1-202ENST00000396629 CDCP2Q5VXM1 449 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 KDM7AQ6ZMT4 941 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 SPATS2Q86XZ4 545 aaKnown RBP8.79□□□□□ -1
SCFD1-202ENST00000396629 LURAP1LQ8IV03 231 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 LSMEM2Q8N112 164 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 GANCQ8TET4 914 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 TMEM174Q8WUU8 243 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 TTC17Q96AE7 1141 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 MED8Q96G25 268 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 NAF1Q96HR8 494 aaKnown RBP8.79□□□□□ -1
SCFD1-202ENST00000396629 LMLNQ96KR4 655 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 C7orf25Q9BPX7 421 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 DPH1Q9BZG8 443 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 CUEDC2Q9H467 287 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 MTG2Q9H4K7 406 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 CYP3A43Q9HB55 503 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 DMAC2Q9NW81 257 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
SCFD1-202ENST00000396629 PCDHB1Q9Y5F3 818 aa8.79□□□□□ -1
SCFD1-202ENST00000396629 A0A1W2PP55 124 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 MID1O15344 667 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 RNASEH1O60930 286 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 SIN3BO75182 1162 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 CD2BP2O95400 341 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 SLFN14P0C7P3 912 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 CD70P32970 193 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 HARS2P49590 506 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 ERVPABLB-1P60509 514 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 DLG4P78352 724 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SRSF1Q07955 248 aaKnown RBP eCLIP8.78□□□□□ -1
SCFD1-202ENST00000396629 VAC14Q08AM6 782 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SLC39A14Q15043 492 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 CST6Q15828 149 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 KNOP1Q1ED39 458 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 HNRNPA1L2Q32P51 320 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 PM20D1Q6GTS8 502 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 UNC13DQ70J99 1090 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SV2AQ7L0J3 742 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 RSRC2Q7L4I2 434 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 MFSD2AQ8NA29 543 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 WFDC5Q8TCV5 224 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 TMC2Q8TDI7 906 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SERAC1Q96JX3 654 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 BACH2Q9BYV9 841 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 OLA1Q9NTK5 396 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 HBS1LQ9Y450 684 aaKnown RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 HECTD1Q9ULT8 2610 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 COL27A1Q8IZC6 1860 aaPredicted RBP8.78□□□□□ -1
SCFD1-202ENST00000396629 LATO43561 262 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SLC28A2O43868 658 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 KIF20AO95235 890 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 HLA-DRAP01903 254 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 LSSP48449 732 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 CSRP3P50461 194 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 SGSHP51688 502 aa8.78□□□□□ -1
SCFD1-202ENST00000396629 ZNF211Q13398 564 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms