RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 BRD8Q9H0E9 1235 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 ZNF70Q9UC06 446 aaPredicted RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 C19orf53Q9UNZ5 99 aaPredicted RBP4.69□□□□□ -1.66
CMC1-202ENST00000396610 SLC12A4Q9UP95 1085 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 RIPOR2Q9Y4F9 1068 aa4.69□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3DA0A087WVF3 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3IA0A087WXS9 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3EA0A087X179 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3KA0A087X1G2 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 hCG_1642624A0A1W2PR95 340 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3BA6NDS4 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3FA6NER0 549 aaPredicted RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 HMX3A6NHT5 357 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 AGAP5A6NIR3 686 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 MBD3L5A6NJ08 208 aaPredicted RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 C3orf70A6NLC5 250 aaPredicted RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3LB9A6J9 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 RFPL3SP0C7P2 107 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3HP0C7X1 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 IGFBP2P18065 325 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 POLE2P56282 527 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 RBM6P78332 1123 aaKnown RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 SHC2P98077 582 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 ZNF91Q05481 1191 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 POSTNQ15063 836 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 RPS6KA2Q15349 733 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 FAM110CQ1W6H9 321 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 ANXA2RQ3ZCQ2 193 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 GLE1Q53GS7 698 aaKnown RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 ZNF569Q5MCW4 686 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 ANO1Q5XXA6 986 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3GQ6DHY5 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3CQ6IPX1 549 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 ZNF474Q6S9Z5 364 aaPredicted RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 CCDC117Q8IWD4 279 aaPredicted RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 TBC1D3Q8IZP1 549 aaPredicted RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 OTUD7AQ8TE49 926 aaPredicted RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 ZFPM2Q8WW38 1151 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 ABHD14AQ9BUJ0 271 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 SCNM1Q9BWG6 230 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 TMEM120AQ9BXJ8 343 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 SRP68Q9UHB9 627 aaKnown RBP4.68□□□□□ -1.66
CMC1-202ENST00000396610 PCSK5Q92824 1860 aa4.68□□□□□ -1.66
CMC1-202ENST00000396610 H0Y3Z8 333 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 CYP3A4P08684 503 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 CYP21A2P08686 494 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 CYP19A1P11511 503 aaPredicted RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 HOXD9P28356 352 aaPredicted RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 SERPINA4P29622 427 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 GRK6P43250 576 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 HSF1Q00613 529 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 B4GALNT1Q00973 533 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 PRKG1Q13976 671 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 ETFDHQ16134 617 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 SLC9C1Q4G0N8 1177 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 KIAA1324Q6UXG2 1013 aaKnown RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 ZNF793Q6ZN11 406 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 UEVLDQ8IX04 471 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 SRFBP1Q8NEF9 429 aaKnown RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 TRAPPC12Q8WVT3 735 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 CPT1BQ92523 772 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 CUL5Q93034 780 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 TRAPPC9Q96Q05 1148 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 OSBPL5Q9H0X9 879 aaPredicted RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 WDR26Q9H7D7 661 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 LIN7CQ9NUP9 197 aaKnown RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 BTBD3Q9Y2F9 522 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 COPG1Q9Y678 874 aaKnown RBP4.67□□□□□ -1.66
CMC1-202ENST00000396610 SPATA31A5Q5VU36 1347 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 EMSYQ7Z589 1322 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 SPATA31A7Q8IWB4 1347 aa4.67□□□□□ -1.66
CMC1-202ENST00000396610 EFCAB8A8MWE9 144 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 IFRD1O00458 451 aaPredicted RBP4.66□□□□□ -1.66
CMC1-202ENST00000396610 TOP3BO95985 862 aaKnown RBP4.66□□□□□ -1.66
CMC1-202ENST00000396610 ENO1P06733 434 aaKnown RBP4.66□□□□□ -1.66
CMC1-202ENST00000396610 ALDOCP09972 364 aaKnown RBP4.66□□□□□ -1.66
CMC1-202ENST00000396610 AKR1A1P14550 325 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 TFEBP19484 476 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 TGM2P21980 687 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 RCAN1P53805 252 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 PDCLQ13371 301 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 PGM5Q15124 567 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 DGAT2L7PQ6IED9 249 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 SYNE3Q6ZMZ3 975 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 NKAPQ8N5F7 415 aaKnown RBP4.66□□□□□ -1.66
CMC1-202ENST00000396610 ADPRHL1Q8NDY3 354 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 PRSS3P2Q8NHM4 247 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 SLC2A12Q8TD20 617 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 WIPF2Q8TF74 440 aaPredicted RBP4.66□□□□□ -1.66
CMC1-202ENST00000396610 CCT6BQ92526 530 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 ZNF778Q96MU6 729 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 SIGLEC11Q96RL6 698 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 ZNF347Q96SE7 839 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 HTATIP2Q9BUP3 242 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 MYLK2Q9H1R3 596 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 PPCSQ9HAB8 311 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 MOV10Q9HCE1 1003 aaKnown RBP4.66□□□□□ -1.66
CMC1-202ENST00000396610 TMEM184CQ9NVA4 438 aa4.66□□□□□ -1.66
CMC1-202ENST00000396610 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms