RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PCID2Q5JVF3 399 aa16■□□□□ 0.15
GNE-202ENST00000396594 GJB7Q6PEY0 223 aa16■□□□□ 0.15
GNE-202ENST00000396594 ACTL9Q8TC94 416 aa16■□□□□ 0.15
GNE-202ENST00000396594 MORF4L1Q9UBU8 362 aa16■□□□□ 0.15
GNE-202ENST00000396594 NPR3P17342 541 aa16■□□□□ 0.15
GNE-202ENST00000396594 INTS6LQ5JSJ4 861 aaKnown RBP16■□□□□ 0.15
GNE-202ENST00000396594 C2orf15Q8WU43 125 aaKnown RBP16■□□□□ 0.15
GNE-202ENST00000396594 DNAJC9Q8WXX5 260 aa16■□□□□ 0.15
GNE-202ENST00000396594 TIFAQ96CG3 184 aa16■□□□□ 0.15
GNE-202ENST00000396594 LHX5Q9H2C1 402 aa16■□□□□ 0.15
GNE-202ENST00000396594 RPS6KB2Q9UBS0 482 aa16■□□□□ 0.15
GNE-202ENST00000396594 CD3EAPO15446 510 aaKnown RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 JCHAINP01591 159 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 ADH1AP07327 375 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 CDC25CP30307 473 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 CCNG1P51959 295 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 WASHC2DQ5SRD0 308 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 FAM46CQ5VWP2 391 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 MTSS1LQ765P7 747 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 ADCK1Q86TW2 530 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 SLC47A2Q86VL8 602 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 ANKRD52Q8NB46 1076 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 ATP11BQ9Y2G3 1177 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 SLC45A1Q9Y2W3 748 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 USP1O94782 785 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 CAPZA2P47755 286 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 GLRA4Q5JXX5 417 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 HECTD3Q5T447 861 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 FAM45BPQ6NSW5 357 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 FAM45AQ8TCE6 357 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 DLG3Q92796 817 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 MLXIPLQ9NP71 852 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 CNGB3Q9NQW8 809 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 GOLGA8RI6L899 631 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 UQCRBP14927 111 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 PTPN1P18031 435 aaKnown RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 POLR2EP19388 210 aaKnown RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 HNRNPH3P31942 346 aaKnown RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 HPCAL1P37235 193 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 GUCA1AP43080 201 aaPredicted RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 LY6KQ17RY6 165 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 TXNDC11Q6PKC3 985 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 NT5MQ9NPB1 228 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 F5H423 210 aaPredicted RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 MAGEC1O60732 1142 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 TRIM13O60858 407 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 TUBP50607 506 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 ADIGQ0VDE8 80 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 ATAD3BQ5T9A4 648 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 FAM171A1Q5VUB5 890 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 IRAK1BP1Q5VVH5 260 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 CDK20Q8IZL9 346 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 MAGED4Q96JG8 741 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 KCTD10Q9H3F6 313 aa15.99■□□□□ 0.15
GNE-202ENST00000396594 SAE1Q9UBE0 346 aaPredicted RBP15.99■□□□□ 0.15
GNE-202ENST00000396594 TK2O00142 265 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 CSPG5O95196 566 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 LAG3P18627 525 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 SP3Q02447 781 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 MIB1Q86YT6 1006 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 ARID3BQ8IVW6 561 aaPredicted RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 PTCD2Q8WV60 388 aaKnown RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 SH2D3AQ9BRG2 576 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 DDX4Q9NQI0 724 aaKnown RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 TBC1D23Q9NUY8 699 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 GNPTGQ9UJJ9 305 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 ZNF286BP0CG31 522 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 H2AFXP16104 143 aaPredicted RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 CHI3L1P36222 383 aaPredicted RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 MMP13P45452 471 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 USP41Q3LFD5 358 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 AFTPHQ6ULP2 937 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 LRRC8DQ7L1W4 858 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 KCNMB4Q86W47 210 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 CNDP1Q96KN2 507 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 SENP8Q96LD8 212 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 OSBPL1AQ9BXW6 950 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 GDF3Q9NR23 364 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 MAN1C1Q9NR34 630 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.98■□□□□ 0.15
GNE-202ENST00000396594 MYOM1P52179 1685 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 RGS14O43566 566 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 KLHL41O60662 606 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 YY1P25490 414 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 ATP6AP1LQ52LC2 224 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 CES5AQ6NT32 575 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 CCDC60Q8IWA6 550 aaPredicted RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 SPPL2BQ8TCT7 592 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 FAM111AQ96PZ2 611 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 DUSP9Q99956 384 aaKnown RBP15.98■□□□□ 0.15
GNE-202ENST00000396594 PCYOX1Q9UHG3 505 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 A0A0A0MRY4 1105 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 MAGEA13PA6NCF6 341 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 LPCAT2Q7L5N7 544 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 FAM71AQ8IYT1 594 aa15.98■□□□□ 0.15
GNE-202ENST00000396594 SETD9Q8NE22 299 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms