RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 MAD1L1Q9Y6D9 718 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 F5H423 210 aaPredicted RBP15.39■□□□□ 0.05
CBX3-202ENST00000396386 IGLV3-25P01717 112 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 C1QAP02745 245 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 MT-ND3P03897 115 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 TAC1P20366 129 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 PSMB4P28070 264 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 CYP2C18P33260 490 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 GRIK1P39086 918 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 OR1G1P47890 313 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 IFRD2Q12894 506 aaPredicted RBP15.39■□□□□ 0.05
CBX3-202ENST00000396386 PARP6Q2NL67 630 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 HHATQ5VTY9 493 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
CBX3-202ENST00000396386 LRRC6Q86X45 466 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 CTAGE3PQ8IX95 158 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 DCP1BQ8IZD4 617 aaKnown RBP15.39■□□□□ 0.05
CBX3-202ENST00000396386 ZNF567Q8N184 647 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 PPM1EQ8WY54 764 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 FAM193BQ96PV7 902 aaPredicted RBP15.39■□□□□ 0.05
CBX3-202ENST00000396386 PLAC1Q9HBJ0 212 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 IGSF9Q9P2J2 1179 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 ZNF180Q9UJW8 692 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 USP15Q9Y4E8 981 aaPredicted RBP15.39■□□□□ 0.05
CBX3-202ENST00000396386 PCDHA11Q9Y5I1 949 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 VWA8A3KMH1 1905 aa15.39■□□□□ 0.05
CBX3-202ENST00000396386 TANC1Q9C0D5 1861 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 SHROOM3Q8TF72 1996 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 ARVCFO00192 962 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 TM9SF1O15321 606 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 IRAK2O43187 625 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 MTSS1O43312 755 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 MX2P20592 715 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 FOXN2P32314 431 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 LIG3P49916 1009 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 PPIDQ08752 370 aaKnown RBP15.38■□□□□ 0.05
CBX3-202ENST00000396386 PDK4Q16654 411 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 SLC39A12Q504Y0 691 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 TTC39BQ5VTQ0 682 aaPredicted RBP15.38■□□□□ 0.05
CBX3-202ENST00000396386 BTBD8Q5XKL5 378 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 LRRC8BQ6P9F7 803 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 RGS9BPQ6ZS82 235 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 SPATA21Q7Z572 469 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 MPP5Q8N3R9 675 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 NPWQ8N729 165 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 PPM1NQ8N819 430 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 SCAMP5Q8TAC9 235 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 HDAC11Q96DB2 347 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 STAMBPL1Q96FJ0 436 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 CEP41Q9BYV8 373 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 ZCWPW1Q9H0M4 648 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 SMOC2Q9H3U7 446 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 ACTR5Q9H9F9 607 aaPredicted RBP15.38■□□□□ 0.05
CBX3-202ENST00000396386 ABCC13Q9NSE7 274 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 TMEM161AQ9NX61 479 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 KLHL8Q9P2G9 620 aaPredicted RBP15.38■□□□□ 0.05
CBX3-202ENST00000396386 OR12D3Q9UGF7 316 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 PHF24Q9UPV7 400 aa15.38■□□□□ 0.05
CBX3-202ENST00000396386 LRIG2O94898 1065 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 SUN1O94901 812 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 OR4Q2P0C623 313 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 COL6A1P12109 1028 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 SELPP16109 830 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 EPHB2P29323 1055 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 FAAP100Q0VG06 881 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 GALNT2Q10471 571 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 SLC1A5Q15758 541 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 SEPT7Q16181 437 aaKnown RBP15.37■□□□□ 0.05
CBX3-202ENST00000396386 BRMS1LQ5PSV4 323 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 LVRNQ6Q4G3 990 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 TP53INP2Q8IXH6 220 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 PDCD7Q8N8D1 485 aaKnown RBP15.37■□□□□ 0.05
CBX3-202ENST00000396386 BANPQ8N9N5 519 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 GRAMD1AQ96CP6 724 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 APOPT1Q96IL0 206 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 OSBPL2Q9H1P3 480 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 RASSF4Q9H2L5 321 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 ABI2Q9NYB9 513 aaPredicted RBP15.37■□□□□ 0.05
CBX3-202ENST00000396386 PRG3Q9Y2Y8 225 aaPredicted RBP15.37■□□□□ 0.05
CBX3-202ENST00000396386 SNX10Q9Y5X0 201 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 FAM159BA6NKW6 160 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 CCT8L1PA6NM43 557 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 TNFRSF10BO14763 440 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 KRT37O76014 449 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 FSBPO95073 299 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 OAZ2O95190 189 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 ALADP13716 330 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 PTPN3P26045 913 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 GRIA1P42261 906 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 MTFR1Q15390 333 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 NFE2Q16621 373 aaPredicted RBP15.37■□□□□ 0.05
CBX3-202ENST00000396386 STEAP4Q687X5 459 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 SCN4BQ8IWT1 228 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 LRRC8CQ8TDW0 803 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 CCT6BQ92526 530 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 FUBP3Q96I24 572 aaKnown RBP eCLIP15.37■□□□□ 0.05
CBX3-202ENST00000396386 PLCD4Q9BRC7 762 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 KDM4CQ9H3R0 1056 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 ARHGEF38Q9NXL2 777 aa15.37■□□□□ 0.05
CBX3-202ENST00000396386 GOLGA8RI6L899 631 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms