RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 MX2P20592 715 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 CORO1AP31146 461 aaKnown RBP14.12□□□□□ -0.15
VAPB-202ENST00000395802 HOXC13P31276 330 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 COILP38432 576 aaPredicted RBP14.12□□□□□ -0.15
VAPB-202ENST00000395802 DR1Q01658 176 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 XRCC4Q13426 336 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 SIX1Q15475 284 aaPredicted RBP14.12□□□□□ -0.15
VAPB-202ENST00000395802 RABGAP1LQ5R372 815 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 ADGRF1Q5T601 910 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 CES5AQ6NT32 575 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 WDR93Q6P2C0 686 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 ANKS1BQ7Z6G8 1248 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 CMTM8Q8IZV2 173 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 PQLC3Q8N755 202 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 VN1R2Q8NFZ6 395 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 LRRC1Q9BTT6 524 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 ZYG11BQ9C0D3 744 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 BRD8Q9H0E9 1235 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 TMPRSS4Q9NRS4 437 aa14.12□□□□□ -0.15
VAPB-202ENST00000395802 COLQQ9Y215 455 aaPredicted RBP14.12□□□□□ -0.15
VAPB-202ENST00000395802 FAM187AA6NFU0 413 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 I6L893 689 aaPredicted RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 ECEL1O95672 775 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ERCC2P18074 760 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 STIP1P31948 543 aaKnown RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 CHKAP35790 457 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 KCNQ1P51787 676 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 CLCN6P51797 869 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 RBM10P98175 930 aaKnown RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 OTUD4Q01804 1114 aaKnown RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 HYAL1Q12794 435 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 AUHQ13825 339 aaKnown RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 PRSS36Q5K4E3 855 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 TTC39BQ5VTQ0 682 aaPredicted RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 ANKRD54Q6NXT1 300 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 TMC5Q6UXY8 1006 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 GPR149Q86SP6 731 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 CHSY1Q86X52 802 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ACTL9Q8TC94 416 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 C1orf54Q8WWF1 131 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 SLCO2A1Q92959 643 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 NKD2Q969F2 451 aaPredicted RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 CYP2S1Q96SQ9 504 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 SLC46A2Q9BY10 475 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 RAB17Q9H0T7 212 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 STOML2Q9UJZ1 356 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ZNF148Q9UQR1 794 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 UTP11Q9Y3A2 253 aaKnown RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 HEY1Q9Y5J3 304 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 MYO9BQ13459 2157 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 CCDC151A5D8V7 595 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 CFAP69A5D8W1 941 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 FAM72CH0Y354 149 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 PPP1R12AO14974 1030 aaPredicted RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 LIASO43766 372 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ITGAVP06756 1048 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 AMPD1P23109 780 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 WEE1P30291 646 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 VSNL1P62760 191 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ADCY2Q08462 1091 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 PAFAH1B3Q15102 231 aaKnown RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 PDK1Q15118 436 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 TEAD2Q15562 447 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ATAT1Q5SQI0 421 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 FAM72AQ5TYM5 149 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 PIK3R6Q5UE93 754 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 MANEALQ5VSG8 457 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 FAM72DQ6L9T8 149 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 GSTA5Q7RTV2 222 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 FAM72BQ86X60 149 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 DENND1CQ8IV53 801 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 KIAA1958Q8N8K9 716 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 CCDC114Q96M63 670 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 RPRD1AQ96P16 312 aaPredicted RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 HERPUD2Q9BSE4 406 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 PRDM12Q9H4Q4 367 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 KIF9Q9HAQ2 790 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 GKN1Q9NS71 199 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 TDP1Q9NUW8 608 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ARGLU1Q9NWB6 273 aaPredicted RBP14.11□□□□□ -0.15
VAPB-202ENST00000395802 SMPD4Q9NXE4 827 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 AMACRQ9UHK6 382 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 VANGL2Q9ULK5 521 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 NR2E1Q9Y466 385 aa14.11□□□□□ -0.15
VAPB-202ENST00000395802 ANAPC1Q9H1A4 1944 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 IGLV3-10A0A075B6K4 115 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 WASH4PA8MWX3 477 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 HACD1B0YJ81 288 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 DCLK1O15075 740 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 RHOQP17081 205 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 TACR2P21452 398 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 ACTN2P35609 894 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 CCR2P41597 374 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 VCPP55072 806 aaKnown RBP14.1□□□□□ -0.15
VAPB-202ENST00000395802 EIF3EP60228 445 aaKnown RBP14.1□□□□□ -0.15
VAPB-202ENST00000395802 ADAM15Q13444 863 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 BRD3Q15059 726 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 NOMO1Q15155 1222 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 PPP1R7Q15435 360 aa14.1□□□□□ -0.15
VAPB-202ENST00000395802 NCBP2-AS2Q69YL0 99 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms