RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ROPN1BQ9BZX4 212 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-204ENST00000395454 ROPN1Q9HAT0 212 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-204ENST00000395454 POPDC2Q9HBU9 364 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 MAGED2Q9UNF1 606 aaPredicted RBP15.63■□□□□ 0.09
SCAF11-204ENST00000395454 BRWD1Q9NSI6 2320 aa15.63■□□□□ 0.09
SCAF11-204ENST00000395454 CCL16O15467 120 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 FYNP06241 537 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 ABHD2P08910 425 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 ZSCAN5DPP0CG00 497 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 RBP3P10745 1247 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 NR1D1P20393 614 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 AIF1P55008 147 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 GPS1Q13098 491 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 KRT71Q3SY84 523 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 UBAP2Q5T6F2 1119 aaKnown RBP15.62■□□□□ 0.09
SCAF11-204ENST00000395454 KCTD16Q68DU8 428 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 SCYL2Q6P3W7 929 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 BEND5Q7L4P6 421 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 PRUNE1Q86TP1 453 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 NUP93Q8N1F7 819 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 IRGQQ8WZA9 623 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 PRCCQ92733 491 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-204ENST00000395454 P3H4Q92791 437 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 SPATA17Q96L03 361 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 MAK16Q9BXY0 300 aaKnown RBP15.62■□□□□ 0.09
SCAF11-204ENST00000395454 LRRC4CQ9HCJ2 640 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 CLDND1Q9NY35 253 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 STAP1Q9ULZ2 295 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 AP4E1Q9UPM8 1137 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 CFAP69A5D8W1 941 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 TNFRSF10BO14763 440 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 APOL1O14791 398 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 ETS1P14921 441 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 IFFO1Q0D2I5 559 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 SCAPQ12770 1279 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 CCDC85BQ15834 202 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-204ENST00000395454 PM20D1Q6GTS8 502 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 ELMOD1Q8N336 334 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 C12orf76Q8N812 135 aaPredicted RBP15.62■□□□□ 0.09
SCAF11-204ENST00000395454 GPATCH2LQ9NWQ4 482 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 RRN3Q9NYV6 651 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 FZD10Q9ULW2 581 aa15.62■□□□□ 0.09
SCAF11-204ENST00000395454 DOCK6Q96HP0 2047 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 GREB1Q4ZG55 1949 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 CCDC195A0A1B0GUA6 201 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 BCLAF3A2AJT9 711 aaKnown RBP15.61■□□□□ 0.09
SCAF11-204ENST00000395454 SLC38A8A6NNN8 435 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 ZFXP17010 805 aaPredicted RBP15.61■□□□□ 0.09
SCAF11-204ENST00000395454 RDXP35241 583 aaKnown RBP15.61■□□□□ 0.09
SCAF11-204ENST00000395454 LMAN1P49257 510 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 ATXN1P54253 815 aaKnown RBP15.61■□□□□ 0.09
SCAF11-204ENST00000395454 USP46P62068 366 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 XRCC4Q13426 336 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 TMC5Q6UXY8 1006 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 RTL10Q7L3V2 364 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 CCDC25Q86WR0 208 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 UNC45BQ8IWX7 931 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 CCDC185Q8N715 623 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 NAT8LQ8N9F0 302 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.61■□□□□ 0.09
SCAF11-204ENST00000395454 PSMG2Q969U7 264 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 NTAN1Q96AB6 310 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 ZNF512Q96ME7 567 aaPredicted RBP15.61■□□□□ 0.09
SCAF11-204ENST00000395454 ULBP1Q9BZM6 244 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 SFXN1Q9H9B4 322 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 USP29Q9HBJ7 922 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 ZDHHC7Q9NXF8 308 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 NINJ2Q9NZG7 142 aa15.61■□□□□ 0.09
SCAF11-204ENST00000395454 ZNF638Q14966 1978 aaKnown RBP15.61■□□□□ 0.09
SCAF11-204ENST00000395454 CSH1P0DML2 217 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 CSH2P0DML3 217 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 HOXA9P31269 272 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 RPL22P35268 128 aaKnown RBP15.6■□□□□ 0.09
SCAF11-204ENST00000395454 NR2C2P49116 596 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 SULT1E1P49888 294 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 DCAF6Q58WW2 860 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 C6orf118Q5T5N4 469 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 DNAJB7Q7Z6W7 309 aaPredicted RBP15.6■□□□□ 0.09
SCAF11-204ENST00000395454 ITIH5Q86UX2 942 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 PPIL6Q8IXY8 311 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 ARFGAP2Q8N6H7 521 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 RSAD2Q8WXG1 361 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 CPT1BQ92523 772 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 FAM149B1Q96BN6 582 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 CEP295NLQ96MC4 621 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 CSPG4P5Q96PW8 444 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 KCTD15Q96SI1 283 aaPredicted RBP15.6■□□□□ 0.09
SCAF11-204ENST00000395454 RBM15Q96T37 977 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCAF11-204ENST00000395454 APOL5Q9BWW9 433 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 FBXO44Q9H4M3 255 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 DZANK1Q9NVP4 752 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 SLC12A6Q9UHW9 1150 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 YJEFN3A6XGL0 299 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 E7ENQ6 273 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 E7ESA3 106 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 XYLBO75191 536 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 RTN3O95197 1032 aaPredicted RBP15.6■□□□□ 0.09
SCAF11-204ENST00000395454 HNRNPA1P09651 372 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCAF11-204ENST00000395454 USP17L7P0C7H9 530 aa15.6■□□□□ 0.09
SCAF11-204ENST00000395454 ADAM15Q13444 863 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms