RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 PCDH20Q8N6Y1 951 aaKnown RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 OR6Y1Q8NGX8 325 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 TBATAQ96M53 351 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 COLEC11Q9BWP8 271 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 TRIT1Q9H3H1 467 aaKnown RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 AXIN2Q9Y2T1 843 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 ADGRA3Q8IWK6 1321 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 RFC5P40937 340 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 CENPCQ03188 943 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 VPS33AQ96AX1 596 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 UBE2OQ9C0C9 1292 aaKnown RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 MFSD1Q9H3U5 465 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 PIGUQ9H490 435 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 INVSQ9Y283 1065 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 GPSM3Q9Y4H4 160 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 A0A075B6Q4 140 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 BTN3A1O00481 513 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 RGS20O76081 388 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 IFNA14P01570 189 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 DBIP07108 87 aaKnown RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 NELFEP18615 380 aaKnown RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 KLRC2P26717 231 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 KLHDC7AQ5VTJ3 777 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 PCDH12Q9NPG4 1184 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 TBX20Q9UMR3 447 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 ATP10BO94823 1461 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 FAM92AA1XBS5 289 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 GJB6O95452 261 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 CRTAMO95727 393 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 WARSP23381 471 aaKnown RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 STILQ15468 1287 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 STOX1Q6ZVD7 989 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 BHLHE22Q8NFJ8 381 aaPredicted RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 FAM50BQ9Y247 325 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 FLT1P17948 1338 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 PSMD14O00487 310 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 RAD51BO15315 384 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 PQBP1O60828 265 aaKnown RBP12.49□□□□□ -0.41
SIN3A-202ENST00000394947 NR1I3Q14994 352 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 RFX4Q33E94 735 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 TFDP3Q5H9I0 405 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 PACS2Q86VP3 889 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 MAGEE2Q8TD90 523 aaPredicted RBP12.49□□□□□ -0.41
SIN3A-202ENST00000394947 KLHL32Q96NJ5 620 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 TBKBP1A7MCY6 615 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 CLOCKO15516 846 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 USP12O75317 370 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 CALCAP01258 141 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 ATP5F1P24539 256 aaPredicted RBP12.49□□□□□ -0.41
SIN3A-202ENST00000394947 CRADDP78560 199 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 XRCC4Q13426 336 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 DHFR2Q86XF0 187 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 TRAPPC5Q8IUR0 188 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 PSMA8Q8TAA3 256 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 SLC20A1Q8WUM9 679 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 UCMAQ8WVF2 138 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 NSMCE2Q96MF7 247 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 PRRG3Q9BZD7 231 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 DKK3Q9UBP4 350 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 COX7A2P14406 83 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 GPR15P49685 360 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 HNMTP50135 292 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 HUNKP57058 714 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 SUZ12Q15022 739 aaKnown RBP12.49□□□□□ -0.41
SIN3A-202ENST00000394947 SPANXN2Q5MJ10 180 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 GPR156Q8NFN8 814 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 TSPAN14Q8NG11 270 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 FAM84BQ96KN1 310 aaPredicted RBP12.49□□□□□ -0.41
SIN3A-202ENST00000394947 ADGRE3Q9BY15 652 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 CRISPLD1Q9H336 500 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
SIN3A-202ENST00000394947 FFAR3O14843 346 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 GPR42O15529 346 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 LGR5O75473 907 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF432O94892 652 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 CYP2A7P20853 494 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 GRB14Q14449 540 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 OLFML1Q6UWY5 402 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 SPATA6LQ8N4H0 392 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 PROX1Q92786 737 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 TOR3AQ9H497 397 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 KCNH7Q9NS40 1196 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 SNTG2Q9NY99 539 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 PTPRTO14522 1441 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 A0A1B0GTH6 734 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 ABHD14A-ACY1A0A1B0GW23 586 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 KPNA4O00629 521 aaPredicted RBP12.49□□□□□ -0.41
SIN3A-202ENST00000394947 CTSEP14091 401 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 OR1E1P30953 314 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 TGM3Q08188 693 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 SPIDRQ14159 915 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 PLA2G4EQ3MJ16 856 aa12.49□□□□□ -0.41
SIN3A-202ENST00000394947 SYT12Q8IV01 421 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms