RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PLIN3O60664 434 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 GLRA3O75311 464 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 FKBP6O75344 327 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 HIC1Q14526 733 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 PCLAFQ15004 111 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 STILQ15468 1287 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 C17orf99Q6UX52 265 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 PACS1Q6VY07 963 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 ACOT1Q86TX2 421 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 ACMSDQ8TDX5 336 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 SLC35F5Q8WV83 523 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 MAML3Q96JK9 1138 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 FDXACB1Q9BRP7 624 aaPredicted RBP18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 KATNBL1Q9H079 304 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 SMARCAD1Q9H4L7 1026 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 XPNPEP3Q9NQH7 507 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 FAM49BQ9NUQ9 324 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 MTMR10Q9NXD2 777 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 PDP2Q9P2J9 529 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 MFHAS1Q9Y4C4 1052 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 NME7Q9Y5B8 376 aa18.88■□□□□ 0.61
PCDHA1-202ENST00000394633 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 STAU1O95793 577 aaKnown RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 SNAI1O95863 264 aaPredicted RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 VAV1P15498 845 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 ARF4P18085 180 aaPredicted RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 IGBP1P78318 339 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 HEATR6Q6AI08 1181 aaKnown RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 TAPT1Q6NXT6 567 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 RAPH1Q70E73 1250 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 SESTD1Q86VW0 696 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 CCNJLQ8IV13 435 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 GALNT15Q8N3T1 639 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 KCTD15Q96SI1 283 aaPredicted RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 MRPL45Q9BRJ2 306 aaKnown RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 RNPEPQ9H4A4 650 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 STN1Q9H668 368 aaKnown RBP18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 S100A14Q9HCY8 104 aa18.87■□□□□ 0.61
PCDHA1-202ENST00000394633 TOMM70O94826 608 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 MYCNP04198 464 aaPredicted RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 PRKCGP05129 697 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 TXNP10599 105 aaKnown RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 ZFXP17010 805 aaPredicted RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 NR2C2P49116 596 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 RALGPS1Q5JS13 557 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 EFHC1Q5JVL4 640 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 NCBP2-AS2Q69YL0 99 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 CASC4Q6P4E1 433 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 AAGABQ6PD74 315 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 ADGRG6Q86SQ4 1221 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 TTC39CQ8N584 583 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 CLEC4CQ8WTT0 213 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 CSPG4P5Q96PW8 444 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 SORT1Q99523 831 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 PNPOQ9NVS9 261 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 PIH1D1Q9NWS0 290 aaKnown RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 DTLQ9NZJ0 730 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 AP4E1Q9UPM8 1137 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 APOBEC2Q9Y235 224 aaKnown RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 ARHGAP42A6NI28 874 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 A6NJR5 290 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 SIN3BO75182 1162 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 KLHL2O95198 593 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 ZCCHC18P0CG32 403 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 ARRB2P32121 409 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 SLC26A2P50443 739 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 ROR2Q01974 943 aaKnown RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 MFN1Q8IWA4 741 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 AFG1LQ8WV93 481 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 TUBGCP5Q96RT8 1024 aa18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 C11orf84Q9BUA3 381 aaPredicted RBP18.86■□□□□ 0.61
PCDHA1-202ENST00000394633 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 SETSIPP0DME0 302 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 DESP17661 470 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 CTGFP29279 349 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 PTPN9P43378 593 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 IDH3AP50213 366 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 SARNPP82979 210 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 MAMDC4Q6UXC1 1216 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 RNF111Q6ZNA4 994 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 RSPH3Q86UC2 560 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 C10orf107Q8IVU9 208 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 FAM124BQ9H5Z6 455 aaPredicted RBP18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 PSAT1Q9Y617 370 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 ZNF236Q9UL36 1845 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 CCNT2O60583 730 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 DGKIO75912 1065 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 SORBS2O94875 1100 aaKnown RBP18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 PROCP04070 461 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 SERPINE1P05121 402 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 MLNP12872 115 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 MGAT1P26572 445 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 ADCYAP1R1P41586 468 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 CCDC185Q8N715 623 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 HTR3CQ8WXA8 447 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 PYDC1Q8WXC3 89 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 ARNTL2Q8WYA1 636 aa18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 CENPIQ92674 756 aaPredicted RBP18.85■□□□□ 0.61
PCDHA1-202ENST00000394633 LPIN3Q9BQK8 851 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms