RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 TMEM120AQ9BXJ8 343 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 DDX43Q9NXZ2 648 aaKnown RBP5.85□□□□□ -1.47
RFFL-202ENST00000394597 AP4S1Q9Y587 144 aa5.85□□□□□ -1.47
RFFL-202ENST00000394597 ADGRA3Q8IWK6 1321 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 CST8O60676 142 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 TTC4O95801 387 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 ALDH2P05091 517 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 CYP1A2P05177 515 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 SLC10A3P09131 477 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 ZNF24P17028 368 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 RPL21P46778 160 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 ARSEP51690 589 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 PRKCZQ05513 592 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 PDIA2Q13087 525 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 ITGADQ13349 1161 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 PAN2Q504Q3 1202 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 PDCD4Q53EL6 469 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 HEATR6Q6AI08 1181 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 LRRC52Q8N7C0 313 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 SCAIQ8N9R8 606 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 DNAAF3Q8N9W5 541 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 EXD1Q8NHP7 514 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 MS4A4AQ96JQ5 239 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 COX4I2Q96KJ9 171 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 FAM84AQ96KN4 292 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 SIK2Q9H0K1 926 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 SIX2Q9NPC8 291 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 DMTF1Q9Y222 760 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 SSX2IPQ9Y2D8 614 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 PCDHA3Q9Y5H8 950 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 ZMYM2Q9UBW7 1377 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 IGKV6D-21A0A0A0MT36 114 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 TMEM247A6NEH6 219 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 KPNA4O00629 521 aaPredicted RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 FCHO1O14526 889 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 CNOT3O75175 753 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 TBX10O75333 385 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 USP1O94782 785 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 GJB6O95452 261 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 CALCAP01258 141 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 MAGEA4P43358 317 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 ALDH7A1P49419 539 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 POU5F1Q01860 360 aaKnown RBP5.84□□□□□ -1.47
RFFL-202ENST00000394597 SMTNL2Q2TAL5 461 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 FSCBQ5H9T9 825 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 ZDHHC17Q8IUH5 632 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 RXFP2Q8WXD0 754 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 RNF19AQ9NV58 838 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 TLL2Q9Y6L7 1015 aa5.84□□□□□ -1.47
RFFL-202ENST00000394597 TAF4O00268 1085 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 GSC2O15499 205 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 PQBP1O60828 265 aaKnown RBP5.84□□□□□ -1.48
RFFL-202ENST00000394597 KRT37O76014 449 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 FBXO21O94952 628 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 CAPN1P07384 714 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 ACO1P21399 889 aaKnown RBP5.84□□□□□ -1.48
RFFL-202ENST00000394597 CD52P31358 61 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 GRK4P32298 578 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 HSPA13P48723 471 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 NR1H2P55055 460 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 VEPH1Q14D04 833 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 RGS21Q2M5E4 152 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 KLHL38Q2WGJ6 581 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 DENND1BQ6P3S1 775 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 RIPOR1Q6ZS17 1223 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 TMEM86AQ8N2M4 240 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 RFWD2Q8NHY2 731 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 SLC7A14Q8TBB6 771 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 SENP8Q96LD8 212 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 PHF12Q96QT6 1004 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 SLC13A1Q9BZW2 595 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 UPF3AQ9H1J1 476 aaKnown RBP5.84□□□□□ -1.48
RFFL-202ENST00000394597 KLHL8Q9P2G9 620 aaPredicted RBP5.84□□□□□ -1.48
RFFL-202ENST00000394597 PSMC3IPQ9P2W1 217 aaPredicted RBP5.84□□□□□ -1.48
RFFL-202ENST00000394597 GIT1Q9Y2X7 761 aa5.84□□□□□ -1.48
RFFL-202ENST00000394597 TIMM13Q9Y5L4 95 aaPredicted RBP5.84□□□□□ -1.48
RFFL-202ENST00000394597 NCANO14594 1321 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 C15orf38-AP3S2A0A0A6YYH1 394 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ZNF839A8K0R7 811 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 H7C4K7 107 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 NCAM1P13591 858 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 UQCRBP14927 111 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 PRMT2P55345 433 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 TPI1P60174 286 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 LSAMPQ13449 338 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FAM187BQ17R55 369 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FAM117BQ6P1L5 589 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ACAD11Q709F0 780 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ARPINQ7Z6K5 226 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 PHF13Q86YI8 300 aaPredicted RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 ANKMY2Q8IV38 441 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 EMC1Q8N766 993 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ERLEC1Q96DZ1 483 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 NFKBIZQ9BYH8 718 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 ING2Q9H160 280 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 NXF3Q9H4D5 531 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 TRPC7Q9HCX4 862 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 FAM105AQ9NUU6 356 aa5.83□□□□□ -1.48
RFFL-202ENST00000394597 RSL24D1Q9UHA3 163 aaKnown RBP5.83□□□□□ -1.48
RFFL-202ENST00000394597 MAGED2Q9UNF1 606 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms