RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 GPLD1P80108 840 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 TMEM35BQ8NCS4 154 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 AGR3Q8TD06 166 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 KAT5Q92993 513 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 CCDC120Q96HB5 630 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ZNF597Q96LX8 424 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 CSF3RQ99062 836 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 TMEM246Q9BRR3 403 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 WDR83Q9BRX9 315 aaKnown RBP12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ANAPC7Q9UJX3 599 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 TRPC5Q9UL62 973 aaPredicted RBP12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 FAM172BPA6NC97 362 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 EML1O00423 815 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 SGPL1O95470 568 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 POLR2CP19387 275 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 ATICP31939 592 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 MAN1A1P33908 653 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 SEPHS1P49903 392 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 DYNLL1P63167 89 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 GBE1Q04446 702 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 FPGSQ05932 587 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 ZNF846Q147U1 533 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 IGSF11Q5DX21 431 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 ANKRD22Q5VYY1 191 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 C16orf46Q6P387 395 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 PALM2Q8IXS6 379 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 LGI2Q8N0V4 545 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC7A3Q8WY07 619 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 ALKBH8Q96BT7 664 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 DOK1Q99704 481 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 RMND5AQ9H871 391 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 NOL11Q9H8H0 719 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 PNPOQ9NVS9 261 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 LRP2BPQ9P2M1 347 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 PRSS51A0A1B0GVH4 220 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 TRIM49D1C9J1S8 452 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 M0QX08 132 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 ZW10O43264 779 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 B4GAT1O43505 415 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 DLGAP3O95886 979 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 IFI30P13284 250 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 ATF4P18848 351 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 CYP7A1P22680 504 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 TNK2Q07912 1038 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 CEACAM7Q14002 265 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 TAF12Q16514 161 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 HIF1AQ16665 826 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 MAVSQ7Z434 540 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 CCDC24Q8N4L8 307 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 OR5H6Q8NGV6 325 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 ZNF420Q8TAQ5 688 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 CMTM5Q96DZ9 223 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC4A5Q9BY07 1137 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 INTS2Q9H0H0 1204 aaKnown RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 UBE2TQ9NPD8 197 aaPredicted RBP12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 MAT2BQ9NZL9 334 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
SLC28A1-203ENST00000394573 POTEB3A0JP26 581 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 SMCO2A6NFE2 343 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 SAC3D1A6NKF1 404 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 ZBTB14O43829 449 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 MARCH6O60337 910 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 CCNKO75909 580 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 KRT8P05787 483 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 ICAM2P13598 275 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 ITIH1P19827 911 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 ATP6V0D1P61421 351 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 OCA2Q04671 838 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 SPCS2Q15005 226 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 KLHL38Q2WGJ6 581 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 POTEBQ6S5H4 581 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 SNX32Q86XE0 403 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 CTAGE3PQ8IX95 158 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 FLCNQ8NFG4 579 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 CHID1Q9BWS9 393 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 MTMR12Q9C0I1 747 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 RAD21L1Q9H4I0 556 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 SP140LQ9H930 580 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 C12orf10Q9HB07 376 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 PARVAQ9NVD7 372 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 ARMC1Q9NVT9 282 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 SFMBT1Q9UHJ3 866 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 AP4E1Q9UPM8 1137 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 PPME1Q9Y570 386 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 PCDHAC2Q9Y5I4 1007 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 C12orf71A8MTZ7 269 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 B8ZZF3 427 aa12.83□□□□□ -0.36
SLC28A1-203ENST00000394573 ATP6V1G2-DDX39BF2Z307 99 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms