RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 HEATR6Q6AI08 1181 aaKnown RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 HFE2Q6ZVN8 426 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 MAVSQ7Z434 540 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 CMC1Q7Z7K0 106 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 CDKL3Q8IVW4 592 aaPredicted RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 DEFB106AQ8N104 65 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 BEST2Q8NFU1 509 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 ARNTL2Q8WYA1 636 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 RILPQ96NA2 401 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 QKIQ96PU8 341 aaKnown RBP eCLIP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 ANLNQ9NQW6 1124 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 ZNF180Q9UJW8 692 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 PCDHA11Q9Y5I1 949 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 USP3Q9Y6I4 520 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 CCDC78A2IDD5 438 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 DPPA5A6NC42 116 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 FAM72CH0Y354 149 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 CREB3O43889 395 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 PSMG1O95456 288 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 C6orf222P0C671 652 aaPredicted RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 PDE1CQ14123 709 aaPredicted RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 FASTKD1Q53R41 847 aaKnown RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 N4BP2L1Q5TBK1 243 aaPredicted RBP13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 FAM72AQ5TYM5 149 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 C9orf57Q5W0N0 161 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 FAM72DQ6L9T8 149 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 SAPCD2Q86UD0 394 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 FAM72BQ86X60 149 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 COLGALT1Q8NBJ5 622 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 DNAJC9Q8WXX5 260 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 AGAP3Q96P47 875 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 DCLRE1BQ9H816 532 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 PNPOQ9NVS9 261 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 SYBUQ9NX95 663 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 MOCS1Q9NZB8 636 aa13.88□□□□□ -0.19
GTF2F1-201ENST00000394456 SMIM28A0A1B0GU29 152 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 C17orf102A2RUQ5 167 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 CRHR2Q13324 411 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 SYPL2Q5VXT5 272 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 RGMBQ6NW40 437 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 ALKAL1Q6UXT8 129 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 MCUQ8NE86 351 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 HTR3CQ8WXA8 447 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 ZNF333Q96JL9 665 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 APBA2Q99767 749 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 SYT15Q9BQS2 421 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 THTPAQ9BU02 230 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 XPNPEP3Q9NQH7 507 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 DNAJC16Q9Y2G8 782 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 SNX10Q9Y5X0 201 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 I6L893 689 aaPredicted RBP13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 RNF103O00237 685 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 TRDMT1O14717 391 aaKnown RBP13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 KLF11O14901 512 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 SNNO75324 88 aaPredicted RBP13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 KRT38O76015 456 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 PEX19P40855 299 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 CDC42EP1Q00587 391 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 ADIGQ0VDE8 80 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 NME3Q13232 169 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 STX3Q13277 289 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 MUM1Q2TAK8 710 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 DCAF6Q58WW2 860 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 SPDYAQ5MJ70 313 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 UBXN11Q5T124 520 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 OSTM1Q86WC4 334 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 SCG3Q8WXD2 468 aaKnown RBP13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 P2RY11Q96G91 374 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 C7orf26Q96N11 449 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 FCRL3Q96P31 734 aaPredicted RBP13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 PANX3Q96QZ0 392 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 ZIC5Q96T25 663 aa13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.87□□□□□ -0.19
GTF2F1-201ENST00000394456 NVLO15381 856 aaKnown RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 ZMPSTE24O75844 475 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 DGKIO75912 1065 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 FGF3P11487 239 aaPredicted RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 ATP6V1C1P21283 382 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 CCNHP51946 323 aaPredicted RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 SLC25A3Q00325 362 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 PURAQ00577 322 aaKnown RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 SEMA5AQ13591 1074 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 KRT72Q14CN4 511 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 STILQ15468 1287 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 DLG2Q15700 870 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 TNS4Q8IZW8 715 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 ARRDC4Q8NCT1 418 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 PHC3Q8NDX5 983 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 TRPV1Q8NER1 839 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 ACVR1CQ8NER5 493 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 CENPIQ92674 756 aaPredicted RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 APOL2Q9BQE5 337 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 XAB2Q9HCS7 855 aaKnown RBP13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 KCNK4Q9NYG8 393 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 KIAA1257Q9ULG3 409 aa13.86□□□□□ -0.19
GTF2F1-201ENST00000394456 DERAQ9Y315 318 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms