RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 TSPYL1Q9H0U9 437 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 PRDM16Q9HAZ2 1276 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 TMBIM4Q9HC24 238 aa20.27■□□□□ 0.84
RAB5C-202ENST00000393860 MRPL17Q9NRX2 175 aaKnown RBP20.27■□□□□ 0.84
RAB5C-202ENST00000393860 BCCIPQ9P287 314 aaKnown RBP eCLIP20.27■□□□□ 0.84
RAB5C-202ENST00000393860 LCHNA4D1U4 455 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 HACD1B0YJ81 288 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 TLR5O60602 858 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 METTL18O95568 372 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 NUDT17P0C025 328 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 LINC00271P0C7V0 271 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 HTRA4P83105 476 aaPredicted RBP20.26■□□□□ 0.83
RAB5C-202ENST00000393860 PDIA2Q13087 525 aaKnown RBP20.26■□□□□ 0.83
RAB5C-202ENST00000393860 PLD1Q13393 1074 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 KCNJ11Q14654 390 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 PDK1Q15118 436 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 MSS51Q4VC12 460 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 PIK3R6Q5UE93 754 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 CAPN12Q6ZSI9 719 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 ANKMY2Q8IV38 441 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 CCDC13Q8IYE1 715 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 P2RY11Q96G91 374 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 ZNF512Q96ME7 567 aaPredicted RBP20.26■□□□□ 0.83
RAB5C-202ENST00000393860 COMMD8Q9NX08 183 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.26■□□□□ 0.83
RAB5C-202ENST00000393860 PLXNA4Q9HCM2 1894 aa20.26■□□□□ 0.83
RAB5C-202ENST00000393860 GOLGA6CA6NDK9 693 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 GOLGA6L10A6NI86 522 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 PRRG1O14668 218 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 PPP1R12AO14974 1030 aaPredicted RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TEX28O15482 410 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TTC4O95801 387 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 ZDHHC11BP0C7U3 371 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 MYZAPP0CAP1 466 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 GOLGA6DP0CG33 693 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 PPM1AP35813 382 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 PSEN1P49768 467 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 HIF1AQ16665 826 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TPGS2Q68CL5 300 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 ZBED8Q8IZ13 594 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 ETNK1Q9HBU6 452 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 OLA1Q9NTK5 396 aaKnown RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 GOLGA6AQ9NYA3 693 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 ZMYND8Q9ULU4 1186 aaPredicted RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TLDC2A0PJX2 215 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 RNF103O00237 685 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 HMGA1P17096 107 aaKnown RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 CAPN2P17655 700 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 ALDH1A3P47895 512 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TWF1Q12792 350 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 RAB33AQ14088 237 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TRIP4Q15650 581 aaPredicted RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 ARTNQ5T4W7 220 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 MANEALQ5VSG8 457 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 ARHGEF18Q6ZSZ5 1173 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 HOOK3Q86VS8 718 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 KLHL23Q8NBE8 558 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 EPS8L3Q8TE67 593 aaKnown RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 TBC1D31Q96DN5 1066 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 FOXP3Q9BZS1 431 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 UBE2OQ9C0C9 1292 aaKnown RBP20.25■□□□□ 0.83
RAB5C-202ENST00000393860 MPP6Q9NZW5 540 aa20.25■□□□□ 0.83
RAB5C-202ENST00000393860 E9PAM4 449 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 KCNK1O00180 336 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 NDC80O14777 642 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 GCATO75600 419 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 APOEP02649 317 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 SLCO1A2P46721 670 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 TUBP50607 506 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 IRAK1P51617 712 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 DNAJC21Q5F1R6 531 aaKnown RBP20.24■□□□□ 0.83
RAB5C-202ENST00000393860 ANKRD20A2Q5SQ80 823 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 ANKRD20A1Q5TYW2 823 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 ANKRD20A3Q5VUR7 823 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 CENPUQ71F23 418 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 PDZD4Q76G19 769 aaPredicted RBP20.24■□□□□ 0.83
RAB5C-202ENST00000393860 ZBP1Q9H171 429 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 VANGL2Q9ULK5 521 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 SHROOM3Q8TF72 1996 aa20.24■□□□□ 0.83
RAB5C-202ENST00000393860 C5orf60A6NFR6 353 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 ZNF135P52742 658 aaPredicted RBP20.23■□□□□ 0.83
RAB5C-202ENST00000393860 EIF3BP55884 814 aaKnown RBP20.23■□□□□ 0.83
RAB5C-202ENST00000393860 ARL4CP56559 192 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 TAF12Q16514 161 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 BBS9Q3SYG4 887 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 KLC2Q9H0B6 622 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 NDFIP2Q9NV92 336 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 NUP205Q92621 2012 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 A0A0A0MRY4 1105 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 DFFAO00273 331 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 APRTP07741 180 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 ELF1P32519 619 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 WASHC5Q12768 1159 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 MS4A13Q5J8X5 152 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 RAP1GAP2Q684P5 730 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 HERC6Q8IVU3 1022 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 ATP6V1G3Q96LB4 118 aa20.23■□□□□ 0.83
RAB5C-202ENST00000393860 SPATA13Q96N96 652 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms