RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 VAV1P15498 845 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 ATP2A2P16615 1042 aaKnown RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 SERPINB6P35237 376 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 VEPH1Q14D04 833 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 COL13A1Q5TAT6 717 aaPredicted RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 MIB1Q86YT6 1006 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 NPWQ8N729 165 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 HTR3CQ8WXA8 447 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 TBC1D31Q96DN5 1066 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 TRMT2BQ96GJ1 504 aaKnown RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 LGMNQ99538 433 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 CDC42EP4Q9H3Q1 356 aaKnown RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 PRDM12Q9H4Q4 367 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 DNAJC17Q9NVM6 304 aaKnown RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 SLC12A8A0AV02 714 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 C5orf60A6NFR6 353 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 PRRG1O14668 218 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 NCAM2O15394 837 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 FGF10O15520 208 aaPredicted RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 RIPK2O43353 540 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 TLL1O43897 1013 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 GCATO75600 419 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 NUDT17P0C025 328 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 SRGAP2BP0DMP2 458 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 MLLT6P55198 1093 aaPredicted RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 BASP1P80723 227 aaKnown RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 RING1Q06587 406 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 TWF1Q12792 350 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 PIK3R6Q5UE93 754 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 ANKRD22Q5VYY1 191 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 DENND2CQ68D51 928 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 RWDD4Q6NW29 188 aaKnown RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 TADA2BQ86TJ2 420 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 TP53INP2Q8IXH6 220 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 ATP6V0D2Q8N8Y2 350 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 NETO2Q8NC67 525 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 CCDC110Q8TBZ0 833 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 ZNF512Q96ME7 567 aaPredicted RBP18.03■□□□□ 0.48
MBD4-202ENST00000393278 INSL5Q9Y5Q6 135 aa18.03■□□□□ 0.48
MBD4-202ENST00000393278 LCHNA4D1U4 455 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 ZNF840PA6NDX5 716 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 ZNF189O75820 626 aaPredicted RBP18.02■□□□□ 0.47
MBD4-202ENST00000393278 CNPP09543 421 aaKnown RBP18.02■□□□□ 0.47
MBD4-202ENST00000393278 KPNA1P52294 538 aaPredicted RBP18.02■□□□□ 0.47
MBD4-202ENST00000393278 CBX1P83916 185 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 UBAP2Q5T6F2 1119 aaKnown RBP18.02■□□□□ 0.47
MBD4-202ENST00000393278 TAB3Q8N5C8 712 aaPredicted RBP18.02■□□□□ 0.47
MBD4-202ENST00000393278 GOLGA6L1Q8N7Z2 621 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 OR2W6PQ8NHA6 318 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 BTN2A3PQ96KV6 586 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 RBM15Q96T37 977 aaKnown RBP eCLIP18.02■□□□□ 0.47
MBD4-202ENST00000393278 PHACTR1Q9C0D0 580 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 CATSPERBQ9H7T0 1116 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 SLC12A6Q9UHW9 1150 aa18.02■□□□□ 0.47
MBD4-202ENST00000393278 ZMYND8Q9ULU4 1186 aaPredicted RBP18.02■□□□□ 0.47
MBD4-202ENST00000393278 TCRBV7S3A2A0A539 114 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 E9PAM4 449 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 CHADO15335 359 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 TMEM63AO94886 807 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 MX2P20592 715 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 EIF3BP55884 814 aaKnown RBP18.01■□□□□ 0.47
MBD4-202ENST00000393278 ZNF844Q08AG5 666 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 GALNT2Q10471 571 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 AP1B1Q10567 949 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 SLC29A2Q14542 456 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 KCNJ11Q14654 390 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 CEP85LQ5SZL2 805 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 KLHDC10Q6PID8 442 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 C14orf80Q86SX3 495 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 CCNYQ8ND76 341 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 HDAC11Q96DB2 347 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 P2RY11Q96G91 374 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 FERMT1Q9BQL6 677 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 KLC2Q9H0B6 622 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 BRD8Q9H0E9 1235 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 MTIF3Q9H2K0 278 aaKnown RBP18.01■□□□□ 0.47
MBD4-202ENST00000393278 RAB6BQ9NRW1 208 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 DNMT3LQ9UJW3 386 aa18.01■□□□□ 0.47
MBD4-202ENST00000393278 HBS1LQ9Y450 684 aaKnown RBP18.01■□□□□ 0.47
MBD4-202ENST00000393278 PLXNA4Q9HCM2 1894 aa18■□□□□ 0.47
MBD4-202ENST00000393278 A0A0A0MRY4 1105 aa18■□□□□ 0.47
MBD4-202ENST00000393278 GOLGA8KD6RF30 607 aa18■□□□□ 0.47
MBD4-202ENST00000393278 RNF40O75150 1001 aa18■□□□□ 0.47
MBD4-202ENST00000393278 TTC4O95801 387 aa18■□□□□ 0.47
MBD4-202ENST00000393278 CA8P35219 290 aa18■□□□□ 0.47
MBD4-202ENST00000393278 ATP5C1P36542 298 aaKnown RBP18■□□□□ 0.47
MBD4-202ENST00000393278 BMPR1AP36894 532 aa18■□□□□ 0.47
MBD4-202ENST00000393278 MAGEA6P43360 314 aa18■□□□□ 0.47
MBD4-202ENST00000393278 TUBP50607 506 aa18■□□□□ 0.47
MBD4-202ENST00000393278 PPIDQ08752 370 aaKnown RBP18■□□□□ 0.47
MBD4-202ENST00000393278 PLD1Q13393 1074 aa18■□□□□ 0.47
MBD4-202ENST00000393278 TAF12Q16514 161 aa18■□□□□ 0.47
MBD4-202ENST00000393278 MS4A13Q5J8X5 152 aa18■□□□□ 0.47
MBD4-202ENST00000393278 HECTD3Q5T447 861 aa18■□□□□ 0.47
MBD4-202ENST00000393278 TMC7Q7Z402 723 aa18■□□□□ 0.47
MBD4-202ENST00000393278 ZNF683Q8IZ20 524 aa18■□□□□ 0.47
MBD4-202ENST00000393278 SPATA13Q96N96 652 aa18■□□□□ 0.47
MBD4-202ENST00000393278 HTATIP2Q9BUP3 242 aa18■□□□□ 0.47
MBD4-202ENST00000393278 NINJ2Q9NZG7 142 aa18■□□□□ 0.47
MBD4-202ENST00000393278 TRPM5Q9NZQ8 1165 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms