RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CFBP00751 764 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 S100A9P06702 114 aaKnown RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 MAPK12P53778 367 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SLC12A2P55011 1212 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 BST1Q10588 318 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 INPP5AQ14642 412 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 AOC3Q16853 763 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 FGD3Q5JSP0 725 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SULT1C3Q6IMI6 304 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CRTC3Q6UUV7 619 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ABRAXAS1Q6UWZ7 409 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 OTOP3Q7RTS5 596 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 PCGF5Q86SE9 256 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 OR8H2Q8N162 312 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SFRP1Q8N474 314 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 DHRSXQ8N5I4 330 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 DTX3Q8N9I9 347 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SLC4A11Q8NBS3 891 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ANKRD49Q8WVL7 239 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SEC14L1Q92503 715 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 PPP1R36Q96LQ0 422 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 C6orf62Q9GZU0 229 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 PCDH10Q9P2E7 1040 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CPQQ9Y646 472 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SLC30A1Q9Y6M5 507 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SESN1Q9Y6P5 492 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ADAMTSL3P82987 1691 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SETD1AO15047 1707 aaKnown RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ATP6V1G2-DDX39BF2Z307 99 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CLIC2O15247 247 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 TOMM70O94826 608 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 POLR2CP19387 275 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 CYP2J2P51589 502 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 PEX3P56589 373 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 LSM3P62310 102 aaKnown RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 MYBPC1Q00872 1141 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 PRPSAP1Q14558 356 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 ZNF267Q14586 743 aaPredicted RBP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.81□□□□□ -1.16
VTI1A-201ENST00000393077 NANOGP8Q6NSW7 305 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 USP37Q86T82 979 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 IGFN1Q86VF2 1251 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SLC38A6Q8IZM9 456 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 UBASH3BQ8TF42 649 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 RAB2BQ8WUD1 216 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 EFCAB1Q9HAE3 211 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 NDFIP2Q9NV92 336 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 SLC17A7Q9P2U7 560 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 STOML2Q9UJZ1 356 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 NUMBLQ9Y6R0 609 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 MYO3BQ8WXR4 1341 aa7.81□□□□□ -1.16
VTI1A-201ENST00000393077 TRPC5OSA6NMA1 111 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ZW10O43264 779 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SORBS3O60504 671 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 WDR47O94967 919 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SMIM18P0DKX4 95 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ACAT1P24752 427 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PRDX6P30041 224 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 RRM2P31350 389 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 IL1RL1Q01638 556 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SP4Q02446 784 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TRIM32Q13049 653 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 MORF4L2Q15014 288 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 GPR162Q16538 588 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ABCB5Q2M3G0 1257 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ASTE1Q2TB18 679 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 UGT3A1Q6NUS8 523 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 FBXL19Q6PCT2 694 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 FKBP9P1Q75LS8 142 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 HDDC2Q7Z4H3 204 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ADGRA1Q86SQ6 560 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ZC3H7AQ8IWR0 971 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 NDUFAF2Q8N183 169 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PPM1KQ8N3J5 372 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ALG3Q92685 438 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 COA7Q96BR5 231 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PIGSQ96S52 555 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TDRD3Q9H7E2 651 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 LRRC4BQ9NT99 713 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 ADPRHL2Q9NX46 363 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PCSK1NQ9UHG2 260 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PCDHGA11Q9Y5H2 935 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PCDHGA10Q9Y5H3 936 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 MYH7P12883 1935 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 TYW5A2RUC4 315 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 BTN3A3O00478 584 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 GNGT2O14610 69 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 STX7O15400 261 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 SNRPAP09012 282 aaKnown RBP7.8□□□□□ -1.16
VTI1A-201ENST00000393077 WEE2P0C1S8 567 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 WEE1P30291 646 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 HTR2BP41595 481 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 EPHA7Q15375 998 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 GARNL3Q5VVW2 1013 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 BROXQ5VW32 411 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 PRR23BQ6ZRT6 265 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 KCTD8Q6ZWB6 473 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 NECAB2Q7Z6G3 386 aa7.8□□□□□ -1.16
VTI1A-201ENST00000393077 STX12Q86Y82 276 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms