RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 ATP11BQ9Y2G3 1177 aa21.55■■□□□ 1.04
NKX3-2-201ENST00000382438 MGEA5O60502 916 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 ME2P23368 584 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 CDKN2BP42772 138 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 NDUFA5Q16718 116 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 TRMT1LQ7Z2T5 733 aaKnown RBP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 MAPK15Q8TD08 544 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 PCDHAC1Q9H158 963 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 DNAJC28Q9NX36 388 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 CNOT11Q9UKZ1 510 aaKnown RBP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 PRPF19Q9UMS4 504 aaKnown RBP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 MEIS2O14770 477 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 CST8O60676 142 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 PTPN2P17706 415 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 DCKP27707 260 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 LRP8Q14114 963 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 SMAD1Q15797 465 aaKnown RBP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 KCNT1Q5JUK3 1230 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 N4BP2L1Q5TBK1 243 aaPredicted RBP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 LGSNQ5TDP6 509 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 C16orf89Q6UX73 402 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 TMA16Q96EY4 203 aaKnown RBP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 FAR2Q96K12 515 aa21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 DUS2Q9NX74 493 aaKnown RBP21.54■■□□□ 1.04
NKX3-2-201ENST00000382438 NEMP1O14524 444 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 CHRNB1P11230 501 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 CSE1LP55060 971 aaKnown RBP21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 OTUD5Q96G74 571 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 HSD17B14Q9BPX1 270 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 SH2D3AQ9BRG2 576 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 STN1Q9H668 368 aaKnown RBP21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 PPP1R1BQ9UD71 204 aaPredicted RBP21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 KLQ9UEF7 1012 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 N6AMT1Q9Y5N5 214 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 TLL2Q9Y6L7 1015 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 PIK3R1P27986 724 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 DPYSL3Q14195 570 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 QRICH1Q2TAL8 776 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 FSCBQ5H9T9 825 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 KRT39Q6A163 491 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 TRMT10BQ6PF06 316 aaKnown RBP21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 FEZF2Q8TBJ5 459 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 MRPL47Q9HD33 250 aaKnown RBP21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 IFT52Q9Y366 437 aa21.53■■□□□ 1.04
NKX3-2-201ENST00000382438 SPAG6O75602 509 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 BCAS2O75934 225 aaPredicted RBP21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 NTSR2O95665 410 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ZNF76P36508 570 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ECE1P42892 770 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 FAM47CQ5HY64 1035 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 DAW1Q8N136 415 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 DOK1Q99704 481 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 MTG1Q9BT17 334 aaPredicted RBP21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 MROQ9BYG7 248 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ANKRD60Q9BZ19 345 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 WDR55Q9H6Y2 383 aaPredicted RBP21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ACSS2Q9NR19 701 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ZC3H7BQ9UGR2 993 aaKnown RBP21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 EMCNQ9ULC0 261 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 YAP1P46937 504 aaKnown RBP21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 EN1Q05925 392 aaPredicted RBP21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ZNF252P-AS1Q0IIN9 211 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 FAXCQ5TGI0 409 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ZBTB49Q6ZSB9 765 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 RNF38Q9H0F5 515 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 RABL2BQ9UNT1 228 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 TRAF6Q9Y4K3 522 aa21.52■■□□□ 1.04
NKX3-2-201ENST00000382438 ZNF142P52746 1687 aaPredicted RBP21.52■■□□□ 1.03
NKX3-2-201ENST00000382438 SNAP91O60641 907 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 CLASP2O75122 1294 aaKnown RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 BCL10O95999 233 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 MYCLP1P12525 358 aaPredicted RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 MATN1P21941 496 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 HPCAL1P37235 193 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 OPRL1P41146 370 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 ITIH5Q86UX2 942 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 MMAAQ8IVH4 418 aaKnown RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 PPWD1Q96BP3 646 aaKnown RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 TDRD1Q9BXT4 1180 aaKnown RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 SMARCAD1Q9H4L7 1026 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 C20orf96Q9NUD7 363 aaPredicted RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 SEL1LQ9UBV2 794 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 SLC30A1Q9Y6M5 507 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 SOCS2O14508 198 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 ACOT8O14734 319 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 CCNA2P20248 432 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 MX2P20592 715 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 HOXA13P31271 388 aaPredicted RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 NSUN2Q08J23 767 aaKnown RBP eCLIP21.51■■□□□ 1.031e-26■■■■■ 95.3
NKX3-2-201ENST00000382438 INAVAQ3KP66 663 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 NHSL2Q5HYW2 709 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 RFPL4BQ6ZWI9 263 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 ZNF420Q8TAQ5 688 aaPredicted RBP21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 DLG3Q92796 817 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 MOCOSQ96EN8 888 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 NANOGQ9H9S0 305 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 WDR41Q9HAD4 459 aa21.51■■□□□ 1.03
NKX3-2-201ENST00000382438 UBE4BO95155 1302 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms